[PDF][PDF] Modification of enhancer chromatin: what, how, and why?

E Calo, J Wysocka - Molecular cell, 2013 - cell.com
Emergence of form and function during embryogenesis arises in large part through cell-type-
and cell-state-specific variation in gene expression patterns, mediated by specialized cis …

Combinations of histone post-translational modifications

BC Taylor, NL Young - Biochemical Journal, 2021 - portlandpress.com
Histones are essential proteins that package the eukaryotic genome into its physiological
state of nucleosomes, chromatin, and chromosomes. Post-translational modifications (PTMs) …

Lactate supports a metabolic-epigenetic link in macrophage polarization

JT Noe, BE Rendon, AE Geller, LR Conroy… - Science …, 2021 - science.org
Lactate accumulation is a hallmark of solid cancers and is linked to the immune suppressive
phenotypes of tumor-infiltrating immune cells. We report herein that interleukin-4 (IL-4) …

Evidence that asthma is a developmental origin disease influenced by maternal diet and bacterial metabolites

AN Thorburn, CI McKenzie, SJ Shen, D Stanley… - Nature …, 2015 - nature.com
Asthma is prevalent in Western countries, and recent explanations have evoked the actions
of the gut microbiota. Here we show that feeding mice a high-fibre diet yields a distinctive gut …

Cryo-EM structure of the human Sirtuin 6–nucleosome complex

US Chio, O Rechiche, AR Bryll, J Zhu, EM Leith… - Science …, 2023 - science.org
Sirtuin 6 (SIRT6) is a multifaceted protein deacetylase/deacylase and a major target for
small-molecule modulators of longevity and cancer. In the context of chromatin, SIRT6 …

[PDF][PDF] Dual-specificity RNA aptamers enable manipulation of target-specific O-GlcNAcylation and unveil functions of O-GlcNAc on β-catenin

Y Zhu, GW Hart - Cell, 2023 - cell.com
O-GlcNAc is a dynamic post-translational modification (PTM) that regulates protein functions.
In studying the regulatory roles of O-GlcNAc, a major roadblock is the inability to change O …

Activity-dependent neuroprotective protein recruits HP1 and CHD4 to control lineage-specifying genes

V Ostapcuk, F Mohn, SH Carl, A Basters, D Hess… - Nature, 2018 - nature.com
De novo mutations in ADNP, which encodes activity-dependent neuroprotective protein
(ADNP), have recently been found to underlie Helsmoortel–Van der Aa syndrome, a …

Histone propionylation is a mark of active chromatin

AF Kebede, A Nieborak, LZ Shahidian… - Nature structural & …, 2017 - nature.com
Histones are highly covalently modified, but the functions of many of these modifications
remain unknown. In particular, it is unclear how histone marks are coupled to cellular …

HDAC inhibitor sodium butyrate-mediated epigenetic regulation enhances neuroprotective function of microglia during ischemic stroke

R Patnala, TV Arumugam, N Gupta, ST Dheen - Molecular Neurobiology, 2017 - Springer
Cerebral ischemia leads to neuroinflammation and activation of microglia which further
contribute to stroke pathology. Understanding regulation of microglial activation will aid in …

[HTML][HTML] Caffeine intake exerts dual genome-wide effects on hippocampal metabolism and learning-dependent transcription

I Paiva, L Cellai, C Meriaux, L Poncelet… - The Journal of …, 2022 - Am Soc Clin Investig
JCI - Caffeine intake exerts dual genome-wide effects on hippocampal metabolism and
learning-dependent transcription Go to JCI Insight About Editors Consulting Editors For authors …