Selection signatures in livestock genome: A review of concepts, approaches and applications
Livestock populations have been consistently improving in terms of performance and
productivity by selective breeding over the centuries. These selection strategies are …
productivity by selective breeding over the centuries. These selection strategies are …
Genomic clues of the evolutionary history of Bos indicus cattle
YT Utsunomiya, M Milanesi, MRS Fortes… - Animal …, 2019 - Wiley Online Library
Together with their sister subspecies Bos taurus, zebu cattle (Bos indicus) have contributed
to important socioeconomic changes that have shaped modern civilizations. Zebu cattle …
to important socioeconomic changes that have shaped modern civilizations. Zebu cattle …
Domestication of cattle: Two or three events?
Cattle have been invaluable for the transition of human society from nomadic hunter‐
gatherers to sedentary farming communities throughout much of Europe, Asia and Africa …
gatherers to sedentary farming communities throughout much of Europe, Asia and Africa …
How array design creates SNP ascertainment bias
Single nucleotide polymorphisms (SNPs), genotyped with arrays, have become a widely
used marker type in population genetic analyses over the last 10 years. However, compared …
used marker type in population genetic analyses over the last 10 years. However, compared …
On the origin of European sheep as revealed by the diversity of the Balkan breeds and by optimizing population-genetic analysis tools
E Ciani, S Mastrangelo, A Da Silva, F Marroni… - Genetics Selection …, 2020 - Springer
Abstract Background In the Neolithic, domestic sheep migrated into Europe and
subsequently spread in westerly and northwesterly directions. Reconstruction of these …
subsequently spread in westerly and northwesterly directions. Reconstruction of these …
The SYNBREED chicken diversity panel: a global resource to assess chicken diversity at high genomic resolution
DK Malomane, H Simianer, A Weigend, C Reimer… - BMC genomics, 2019 - Springer
Background Since domestication, chickens did not only disperse into the different parts of
the world but they have also undergone significant genomic changes in this process. Many …
the world but they have also undergone significant genomic changes in this process. Many …
Modeling of African population history using f-statistics is biased when applying all previously proposed SNP ascertainment schemes
f-statistics have emerged as a first line of analysis for making inferences about demographic
history from genome-wide data. Not only are they guaranteed to allow robust tests of the fits …
history from genome-wide data. Not only are they guaranteed to allow robust tests of the fits …
Applying genomic data in wildlife monitoring: Development guidelines for genotyping degraded samples with reduced single nucleotide polymorphism panels
A von Thaden, C Nowak, A Tiesmeyer… - Molecular ecology …, 2020 - Wiley Online Library
The genomic era has led to an unprecedented increase in the availability of genome‐wide
data for a broad range of taxa. Wildlife management strives to make use of these vast …
data for a broad range of taxa. Wildlife management strives to make use of these vast …
Genomics Reveals Complex Population History and Unexpected Diversity of Eurasian Otters (Lutra lutra) in Britain Relative to Genetic Methods
Conservation genetic analyses of many endangered species have been based on
genotyping of microsatellite loci and sequencing of short fragments of mtDNA. The increase …
genotyping of microsatellite loci and sequencing of short fragments of mtDNA. The increase …
Genetic Diversity and Signatures of Selection for Thermal Stress in Cattle and Other Two Bos Species Adapted to Divergent Climatic Conditions
PHF Freitas, Y Wang, P Yan, HR Oliveira… - Frontiers in …, 2021 - frontiersin.org
Understanding the biological mechanisms of climatic adaptation is of paramount importance
for the optimization of breeding programs and conservation of genetic resources. The aim of …
for the optimization of breeding programs and conservation of genetic resources. The aim of …