Genomics of evolutionary novelty in hybrids and polyploids

G Nieto Feliner, J Casacuberta, JF Wendel - Frontiers in genetics, 2020 - frontiersin.org
It has long been recognized that hybridization and polyploidy are prominent processes in
plant evolution. Although classically recognized as significant in speciation and adaptation …

Transposable elements: major players in shaping genomic and evolutionary patterns

N Colonna Romano, L Fanti - Cells, 2022 - mdpi.com
Transposable elements (TEs) are ubiquitous genetic elements, able to jump from one
location of the genome to another, in all organisms. For this reason, on the one hand, TEs …

Analyses of 600+ insect genomes reveal repetitive element dynamics and highlight biodiversity-scale repeat annotation challenges

JS Sproul, S Hotaling, J Heckenhauer… - Genome …, 2023 - genome.cshlp.org
Repetitive elements (REs) are integral to the composition, structure, and function of
eukaryotic genomes, yet remain understudied in most taxonomic groups. We investigated …

[PDF][PDF] Going beyond SNPs: The role of structural genomic variants in adaptive evolution and species diversification.

M Wellenreuther, C Mérot, E Berdan… - Molecular ecology, 2019 - bio.ulaval.ca
Although single‐nucleotide polymorphism (SNPs) were initially thought to make‐up the
majority of selectable variation (Morin, Luikart, & Wayne, 2004; Sachidanandam et al …

Genomics of cold adaptations in the Antarctic notothenioid fish radiation

I Bista, JMD Wood, T Desvignes, SA McCarthy… - Nature …, 2023 - nature.com
Numerous novel adaptations characterise the radiation of notothenioids, the dominant fish
group in the freezing seas of the Southern Ocean. To improve understanding of the …

Retrotransposon-mediated evolutionary rewiring of a pathogen response orchestrates a resistance phenotype in an insect host

Z Guo, L Guo, Y Bai, S Kang, D Sun… - Proceedings of the …, 2023 - National Acad Sciences
Ongoing host–pathogen interactions can trigger a coevolutionary arms race, while genetic
diversity within the host can facilitate its adaptation to pathogens. Here, we used the …

Genus-wide characterization of bumblebee genomes provides insights into their evolution and variation in ecological and behavioral traits

C Sun, J Huang, Y Wang, X Zhao, L Su… - Molecular biology …, 2021 - academic.oup.com
Bumblebees are a diverse group of globally important pollinators in natural ecosystems and
for agricultural food production. With both eusocial and solitary life-cycle phases, and some …

Two-speed genome evolution drives pathogenicity in fungal pathogens of animals

T Wacker, N Helmstetter, D Wilson… - Proceedings of the …, 2023 - National Acad Sciences
The origins and evolution of virulence in amphibian-infecting chytrids Batrachochytrium
dendrobatidis (Bd) and Batrachochytrium salamandrivorans (Bsal) are largely unknown …

[HTML][HTML] Genome evolution in fungal plant pathogens: looking beyond the two-speed genome model

DE Torres, U Oggenfuss, D Croll, MF Seidl - Fungal Biology Reviews, 2020 - Elsevier
The interaction of pathogens with their hosts creates strong reciprocal selection pressures.
Pathogens often deploy an arsenal of small proteins called effectors that manipulate the …

Divergence time shapes gene reuse during repeated adaptation

M Bohutínská, CL Peichel - Trends in ecology & evolution, 2024 - cell.com
When diverse lineages repeatedly adapt to similar environmental challenges, the extent to
which the same genes are involved (gene reuse) varies across systems. We propose that …