[HTML][HTML] Encephalitis diagnosis using metagenomics: application of next generation sequencing for undiagnosed cases

JR Brown, T Bharucha, J Breuer - Journal of infection, 2018 - Elsevier
Background Current estimates suggest that even in the most resourced settings, the
aetiology of encephalitis is identified in less than half of clinical cases. It is acknowledged …

Eukaryotic circular rep-encoding single-stranded DNA (CRESS DNA) viruses: ubiquitous viruses with small genomes and a diverse host range

L Zhao, K Rosario, M Breitbart, S Duffy - Advances in virus research, 2019 - Elsevier
While single-stranded DNA (ssDNA) was once thought to be a relatively rare genomic
architecture for viruses, modern metagenomics sequencing has revealed circular ssDNA …

Revisiting the taxonomy of the family Circoviridae: establishment of the genus Cyclovirus and removal of the genus Gyrovirus

K Rosario, M Breitbart, B Harrach, J Segalés… - Archives of …, 2017 - Springer
The family Circoviridae contains viruses with covalently closed, circular, single-stranded
DNA (ssDNA) genomes, including the smallest known autonomously replicating, capsid …

2024 taxonomy update for the family Circoviridae

A Varsani, B Harrach, P Roumagnac, M Benkő… - Archives of …, 2024 - Springer
Circovirids have a circular single-stranded DNA genome packed into a small icosahedral
capsid. They are classified within two genera, Circovirus and Cyclovirus, in the family …

Fungal DNA virus infects a mycophagous insect and utilizes it as a transmission vector

S Liu, J Xie, J Cheng, B Li, T Chen… - Proceedings of the …, 2016 - National Acad Sciences
Mycoviruses are usually transmitted horizontally via hyphal anastomosis and vertically via
sexual/asexual spores. Previously, we reported that a gemycircularvirus, Sclerotinia …

Genomoviridae: a new family of widespread single-stranded DNA viruses

M Krupovic, SA Ghabrial, D Jiang, A Varsani - Archives of virology, 2016 - Springer
Here, we introduce a new family of eukaryote-infecting single-stranded (ss) DNA viruses that
was created recently by the International Committee on Taxonomy of Viruses (ICTV). The …

Current Knowledge on Porcine circovirus 3 (PCV-3): A Novel Virus With a Yet Unknown Impact on the Swine Industry

F Klaumann, F Correa-Fiz, G Franzo… - Frontiers in veterinary …, 2018 - frontiersin.org
Porcine circovirus 3 (PCV-3) is a recently described virus belonging to the family
Circoviridae. It represents the third member of genus Circovirus able to infect swine, together …

Virome comparisons in wild-diseased and healthy captive giant pandas

W Zhang, S Yang, T Shan, R Hou, Z Liu, W Li, L Guo… - Microbiome, 2017 - Springer
Abstract Background The giant panda (Ailuropoda melanoleuca) is a vulnerable mammal
herbivore living wild in central China. Viral infections have become a potential threat to the …

Family Genomoviridae: 2021 taxonomy update

A Varsani, M Krupovic - Archives of virology, 2021 - Springer
Abstract The family Genomoviridae (phylum Cressdnaviricota, class Repensiviricetes, order
Geplafuvirales) includes viruses with circular single-stranded DNA genomes encoding two …

Sequence-based taxonomic framework for the classification of uncultured single-stranded DNA viruses of the family Genomoviridae

A Varsani, M Krupovic - Virus evolution, 2017 - academic.oup.com
With the advent of metagenomics approaches, a large diversity of known and unknown
viruses has been identified in various types of environmental, plant, and animal samples …