The analysis of clonal expansions in normal and autoimmune B cell repertoires

U Hershberg, ET Luning Prak - … Transactions of the …, 2015 - royalsocietypublishing.org
Clones are the fundamental building blocks of immune repertoires. The number of different
clones relates to the diversity of the repertoire, whereas their size and sequence diversity …

The importance of B cell receptor isotypes and stereotypes in chronic lymphocytic leukemia

E Ten Hacken, M Gounari, P Ghia, JA Burger - Leukemia, 2019 - nature.com
B cell receptor (BCR) signaling is a central pathway promoting the survival and proliferation
of normal and malignant B cells. Chronic lymphocytic leukemia (CLL) arises from mature B …

Large-scale sequence and structural comparisons of human naive and antigen-experienced antibody repertoires

BJ DeKosky, OI Lungu, D Park… - Proceedings of the …, 2016 - National Acad Sciences
Elucidating how antigen exposure and selection shape the human antibody repertoire is
fundamental to our understanding of B-cell immunity. We sequenced the paired heavy-and …

Distinct homotypic B-cell receptor interactions shape the outcome of chronic lymphocytic leukaemia

C Minici, M Gounari, R Übelhart, L Scarfo… - Nature …, 2017 - nature.com
Cell-autonomous B-cell receptor (BcR)-mediated signalling is a hallmark feature of the
neoplastic B lymphocytes in chronic lymphocytic leukaemia (CLL). Here we elucidate the …

Old and new facts and speculations on the role of the B cell receptor in the origin of chronic lymphocytic leukemia

D Bagnara, AN Mazzarello, F Ghiotto… - International Journal of …, 2022 - mdpi.com
The engagement of the B cell receptor (BcR) on the surface of leukemic cells represents a
key event in chronic lymphocytic leukemia (CLL) since it can lead to the maintenance and …

LYRA, a webserver for lymphocyte receptor structural modeling

MS Klausen, MV Anderson, MC Jespersen… - Nucleic Acids …, 2015 - academic.oup.com
The accurate structural modeling of B-and T-cell receptors is fundamental to gain a detailed
insight in the mechanisms underlying immunity and in developing new drugs and therapies …

Chronic lymphocytic leukemia B-cell normal cellular counterpart: clues from a functional perspective

W Darwiche, B Gubler, JP Marolleau… - Frontiers in …, 2018 - frontiersin.org
Chronic lymphocytic leukemia (CLL) is characterized by the clonal expansion of small
mature-looking CD19+ CD23+ CD5+ B-cells that accumulate in the blood, bone marrow …

Antibody informatics for drug discovery

H Shirai, C Prades, R Vita, P Marcatili, B Popovic… - … et Biophysica Acta (BBA …, 2014 - Elsevier
More and more antibody therapeutics are being approved every year, mainly due to their
high efficacy and antigen selectivity. However, it is still difficult to identify the antigen, and …

The complex interplay between cell-intrinsic and cell-extrinsic factors driving the evolution of chronic lymphocytic leukemia

LA Sutton, R Rosenquist - Seminars in cancer biology, 2015 - Elsevier
With the advent of next-generation sequencing, the mutational landscape of chronic
lymphocytic leukemia (CLL) was rapidly unraveled with the discovery of recurrently mutated …

Antibody modeling using the Prediction of ImmunoGlobulin Structure (PIGS) web server

P Marcatili, PP Olimpieri, A Chailyan, A Tramontano - Nature protocols, 2014 - nature.com
Antibodies (or immunoglobulins) are crucial for defending organisms from pathogens, but
they are also key players in many medical, diagnostic and biotechnological applications …