Systems toxicology approaches for understanding the joint effects of environmental chemical mixtures

DJ Spurgeon, OAH Jones, JLCM Dorne… - Science of the total …, 2010 - Elsevier
Environmental mixtures of chemicals constitute a prevalent issue in ecotoxicology and the
development of new methods to reduce the uncertainties associated with their ecological …

Neural processing, perception, and behavioral responses to natural chemical stimuli by fish and crustaceans

CD Derby, PW Sorensen - Journal of chemical ecology, 2008 - Springer
This manuscript reviews the chemical ecology of two of the major aquatic animal models,
fish and crustaceans, in the study of chemoreception. By necessity, it is restricted in scope …

OrthoDB v9. 1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs

EM Zdobnov, F Tegenfeldt, D Kuznetsov… - Nucleic acids …, 2017 - academic.oup.com
OrthoDB is a comprehensive catalog of orthologs, genes inherited by extant species from a
single gene in their last common ancestor. In 2016 OrthoDB reached its 9th release, growing …

The Ecoresponsive Genome of Daphnia pulex

JK Colbourne, ME Pfrender, D Gilbert, WK Thomas… - Science, 2011 - science.org
We describe the draft genome of the microcrustacean Daphnia pulex, which is only 200
megabases and contains at least 30,907 genes. The high gene count is a consequence of …

OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs

RM Waterhouse, F Tegenfeldt, J Li… - Nucleic acids …, 2013 - academic.oup.com
The concept of orthology provides a foundation for formulating hypotheses on gene and
genome evolution, and thus forms the cornerstone of comparative genomics, phylogenomics …

OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software

EV Kriventseva, F Tegenfeldt, TJ Petty… - Nucleic acids …, 2015 - academic.oup.com
Orthology, refining the concept of homology, is the cornerstone of evolutionary comparative
studies. With the ever-increasing availability of genomic data, inference of orthology has …

Environmental Sex Determination in the Branchiopod Crustacean Daphnia magna: Deep Conservation of a Doublesex Gene in the Sex-Determining Pathway

Y Kato, K Kobayashi, H Watanabe, T Iguchi - PLoS Genetics, 2011 - journals.plos.org
Sex-determining mechanisms are diverse among animal lineages and can be broadly
divided into two major categories: genetic and environmental. In contrast to genetic sex …

[PDF][PDF] Toxicogenomics in regulatory ecotoxicology

GT Ankley, GP Daston, SJ Degitz, ND Denslow… - 2006 - ACS Publications
Recently, we have witnessed an explosion of different genomic approaches that, through a
combination of advanced biological, instrumental, and bioinformatic techniques, can yield a …

Daphnia magna and mixture toxicity with nanomaterials–Current status and perspectives in data-driven risk prediction

DST Martinez, LJA Ellis, GH Da Silva, R Petry… - Nano Today, 2022 - Elsevier
The aquatic ecosystem is the final destination of most industrial residues and agrochemicals
resulting in organisms being exposed to a complex mixture of contaminants. Nanomaterials …

[图书][B] An introduction to ecological genomics

NM Van Straalen, D Roelofs - 2011 - books.google.com
The genomics revolution has expanded from its origins in molecular biology to impact upon
every discipline in the life sciences, including ecology. Several lines of ecological research …