Concepts of artificial intelligence for computer-assisted drug discovery

X Yang, Y Wang, R Byrne, G Schneider… - Chemical …, 2019 - ACS Publications
Artificial intelligence (AI), and, in particular, deep learning as a subcategory of AI, provides
opportunities for the discovery and development of innovative drugs. Various machine …

Artificial intelligence and machine learning‐aided drug discovery in central nervous system diseases: State‐of‐the‐arts and future directions

S Vatansever, A Schlessinger, D Wacker… - Medicinal research …, 2021 - Wiley Online Library
Neurological disorders significantly outnumber diseases in other therapeutic areas.
However, developing drugs for central nervous system (CNS) disorders remains the most …

Deep-learning-based drug–target interaction prediction

M Wen, Z Zhang, S Niu, H Sha, R Yang… - Journal of proteome …, 2017 - ACS Publications
Identifying interactions between known drugs and targets is a major challenge in drug
repositioning. In silico prediction of drug–target interaction (DTI) can speed up the expensive …

[HTML][HTML] SimBoost: a read-across approach for predicting drug–target binding affinities using gradient boosting machines

T He, M Heidemeyer, F Ban, A Cherkasov… - Journal of …, 2017 - Springer
Computational prediction of the interaction between drugs and targets is a standing
challenge in the field of drug discovery. A number of rather accurate predictions were …

Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review

P Csermely, T Korcsmáros, HJM Kiss, G London… - Pharmacology & …, 2013 - Elsevier
Despite considerable progress in genome-and proteome-based high-throughput screening
methods and in rational drug design, the increase in approved drugs in the past decade did …

[HTML][HTML] Predicting drug-target interaction networks based on functional groups and biological features

Z He, J Zhang, XH Shi, LL Hu, X Kong, YD Cai… - PloS one, 2010 - journals.plos.org
Background Study of drug-target interaction networks is an important topic for drug
development. It is both time-consuming and costly to determine compound-protein …

ChemoPy: freely available python package for computational biology and chemoinformatics

DS Cao, QS Xu, QN Hu, YZ Liang - Bioinformatics, 2013 - academic.oup.com
Motivation: Molecular representation for small molecules has been routinely used in
QSAR/SAR, virtual screening, database search, ranking, drug ADME/T prediction and other …

Novel computational approaches to polypharmacology as a means to define responses to individual drugs

L Xie, L Xie, SL Kinnings… - Annual review of …, 2012 - annualreviews.org
Polypharmacology, which focuses on designing therapeutics to target multiple receptors,
has emerged as a new paradigm in drug discovery. Polypharmacological effects are an …

In-Silico Approaches to Multi-target Drug Discovery: Computer Aided Multi-target Drug Design, Multi-target Virtual Screening

XH Ma, Z Shi, C Tan, Y Jiang, ML Go, BC Low… - Pharmaceutical …, 2010 - Springer
Multi-target drugs against selective multiple targets improve therapeutic efficacy, safety and
resistance profiles by collective regulations of a primary therapeutic target together with …

Advancement of multi-target drug discoveries and promising applications in the field of Alzheimer's disease

T Wang, X Liu, J Guan, S Ge, MB Wu, J Lin… - European Journal of …, 2019 - Elsevier
Complex diseases (eg, Alzheimer's disease) or infectious diseases are usually caused by
complicated and varied factors, including environmental and genetic factors. Multi-target …