Deep learning object detection in materials science: Current state and future directions

R Jacobs - Computational Materials Science, 2022 - Elsevier
Deep learning-based object detection models have recently found widespread use in
materials science, with rapid progress made in just the past two years. Scanning and …

A large expert-curated cryo-EM image dataset for machine learning protein particle picking

A Dhakal, R Gyawali, L Wang, J Cheng - Scientific Data, 2023 - nature.com
Cryo-electron microscopy (cryo-EM) is a powerful technique for determining the structures of
biological macromolecular complexes. Picking single-protein particles from cryo-EM …

Performance and limitations of deep learning semantic segmentation of multiple defects in transmission electron micrographs

R Jacobs, M Shen, Y Liu, W Hao, X Li, R He… - Cell Reports Physical …, 2022 - cell.com
Transmission electron microscopy (TEM) is a popular method for characterizing and
quantifying defects in materials. Analyzing digitized TEM images is typically done manually …

Advancing electron microscopy using deep learning

K Chen, AS Barnard - Journal of Physics: Materials, 2024 - iopscience.iop.org
Electron microscopy, a sub-field of microanalysis, is critical to many fields of research. The
widespread use of electron microscopy for imaging molecules and materials has had an …

[HTML][HTML] CryoPPP: a large expert-labelled cryo-EM image dataset for machine learning protein particle picking

A Dhakal, R Gyawali, L Wang, J Cheng - bioRxiv, 2023 - ncbi.nlm.nih.gov
Cryo-electron microscopy (cryo-EM) is currently the most powerful technique for determining
the structures of large protein complexes and assemblies. Picking single-protein particles …

REPIC—an ensemble learning methodology for cryo-EM particle picking

CJF Cameron, SJH Seager, FJ Sigworth, HD Tagare… - bioRxiv, 2023 - biorxiv.org
Cryo-EM (cryogenic electron microscopy) particle identification from micrographs (ie,
picking) is challenging due to the low signal-to-noise ratio and lack of ground truth for …

A Segmentation-aware Synergy Network for Single Particle Recognition in Cryo-EM

S Li, H Li, C Zhang, F Zhang… - 2022 IEEE International …, 2022 - ieeexplore.ieee.org
Cryo-electron microscopy (cryo-EM) single particle analysis (SPA) has been an
indispensable technology to reconstruct three-dimensional (3D) structures of biomolecules …