Mutualistic interplay between bacteriophages and bacteria in the human gut
Bacteriophages (phages) are often described as obligate predators of their bacterial hosts,
and phage predation is one of the leading forces controlling the density and distribution of …
and phage predation is one of the leading forces controlling the density and distribution of …
Horizontal gene transfer among host-associated microbes
Horizontal gene transfer is an important evolutionary force, facilitating bacterial diversity. It is
thought to be pervasive in host-associated microbiomes, where bacterial densities are high …
thought to be pervasive in host-associated microbiomes, where bacterial densities are high …
[HTML][HTML] Expanding known viral diversity in the healthy infant gut
The gut microbiome is shaped through infancy and impacts the maturation of the immune
system, thus protecting against chronic disease later in life. Phages, or viruses that infect …
system, thus protecting against chronic disease later in life. Phages, or viruses that infect …
[HTML][HTML] Extensive gut virome variation and its associations with host and environmental factors in a population-level cohort
S Nishijima, N Nagata, Y Kiguchi, Y Kojima… - Nature …, 2022 - nature.com
Indigenous bacteriophage communities (virome) in the human gut have a huge impact on
the structure and function of gut bacterial communities (bacteriome), but virome variation at a …
the structure and function of gut bacterial communities (bacteriome), but virome variation at a …
Phage-inclusive profiling of human gut microbiomes with Phanta
Due to technical limitations, most gut microbiome studies have focused on prokaryotes,
overlooking viruses. Phanta, a virome-inclusive gut microbiome profiling tool, overcomes the …
overlooking viruses. Phanta, a virome-inclusive gut microbiome profiling tool, overcomes the …
[HTML][HTML] Minnesota peat viromes reveal terrestrial and aquatic niche partitioning for local and global viral populations
AM Ter Horst, C Santos-Medellín, JW Sorensen… - Microbiome, 2021 - Springer
Background Peatlands are expected to experience sustained yet fluctuating higher
temperatures due to climate change, leading to increased microbial activity and greenhouse …
temperatures due to climate change, leading to increased microbial activity and greenhouse …
[HTML][HTML] Unraveling the viral dark matter through viral metagenomics
TM Santiago-Rodriguez, EB Hollister - Frontiers in immunology, 2022 - frontiersin.org
Viruses are part of the microbiome and have essential roles in immunology, evolution,
biogeochemical cycles, health, and disease progression. Viruses influence a wide variety of …
biogeochemical cycles, health, and disease progression. Viruses influence a wide variety of …
[HTML][HTML] Advances and challenges in cataloging the human gut virome
The human gut virome, which is often referred to as the" dark matter" of the gut microbiome,
remains understudied. A better understanding of the composition and variations of the gut …
remains understudied. A better understanding of the composition and variations of the gut …
[HTML][HTML] Factors affecting variation of the human gut phageome
The gut microbiome is a dense and metabolically active consortium of microorganisms and
viruses located in the lower gastrointestinal tract of the human body. Bacteria and their …
viruses located in the lower gastrointestinal tract of the human body. Bacteria and their …
Cargo Genes of Tn7-Like Transposons Comprise an Enormous Diversity of Defense Systems, Mobile Genetic Elements, and Antibiotic Resistance Genes
Transposition is a major mechanism of horizontal gene mobility in prokaryotes. However,
exploration of the genes mobilized by transposons (cargo) is hampered by the difficulty in …
exploration of the genes mobilized by transposons (cargo) is hampered by the difficulty in …