[HTML][HTML] Invited review: Beef-on-dairy—The generation of crossbred beef× dairy cattle
DP Berry - Journal of Dairy Science, 2021 - Elsevier
Because a growing proportion of the beef output in many countries originates from dairy
herds, the most critical decisions about the genetic merit of most carcasses harvested are …
herds, the most critical decisions about the genetic merit of most carcasses harvested are …
Using imputation-based whole-genome sequencing data to improve the accuracy of genomic prediction for combined populations in pigs
H Song, S Ye, Y Jiang, Z Zhang, Q Zhang… - Genetics Selection …, 2019 - Springer
Background For genomic selection in populations with a small reference population,
combining populations of the same breed or populations of related breeds is an effective …
combining populations of the same breed or populations of related breeds is an effective …
Genomic prediction with whole-genome sequence data in intensely selected pig lines
Background Early simulations indicated that whole-genome sequence data (WGS) could
improve the accuracy of genomic predictions within and across breeds. However, empirical …
improve the accuracy of genomic predictions within and across breeds. However, empirical …
Genomic prediction based on selected variants from imputed whole-genome sequence data in Australian sheep populations
Background Whole-genome sequence (WGS) data could contain information on genetic
variants at or in high linkage disequilibrium with causative mutations that underlie the …
variants at or in high linkage disequilibrium with causative mutations that underlie the …
Significance testing and genomic inflation factor using high‐density genotypes or whole‐genome sequence data
S van den Berg, J Vandenplas… - Journal of Animal …, 2019 - Wiley Online Library
Significance testing for genome‐wide association study (GWAS) with increasing SNP
density up to whole‐genome sequence data (WGS) is not straightforward, because of strong …
density up to whole‐genome sequence data (WGS) is not straightforward, because of strong …
Genomic prediction based on SNP functional annotation using imputed whole-genome sequence data in Korean Hanwoo cattle
BIM Lopez, N An, K Srikanth, S Lee, JD Oh… - Frontiers in …, 2021 - frontiersin.org
Whole-genome sequence (WGS) data are increasingly being applied into genomic
predictions, offering a higher predictive ability by including causal mutations or single …
predictions, offering a higher predictive ability by including causal mutations or single …
Genomic prediction based on selective linkage disequilibrium pruning of low-coverage whole-genome sequence variants in a pure Duroc population
D Zhu, Y Zhao, R Zhang, H Wu, G Cai, Z Wu… - Genetics Selection …, 2023 - Springer
Background Although the accumulation of whole-genome sequencing (WGS) data has
accelerated the identification of mutations underlying complex traits, its impact on the …
accelerated the identification of mutations underlying complex traits, its impact on the …
QTLs associated with resistance to cardiomyopathy syndrome in Atlantic salmon
Cardiomyopathy syndrome (CMS) caused by piscine myocarditis virus is a major disease
affecting the Norwegian Atlantic salmon industry. Three different populations of Atlantic …
affecting the Norwegian Atlantic salmon industry. Three different populations of Atlantic …
Use of whole-genome sequence data and novel genomic selection strategies to improve selection for age at puberty in tropically-adapted beef heifers
Background In tropically-adapted beef heifers, application of genomic prediction for age at
puberty has been limited due to low prediction accuracies. Our aim was to investigate novel …
puberty has been limited due to low prediction accuracies. Our aim was to investigate novel …
The impact of non-additive effects on the genetic correlation between populations
Average effects of alleles can show considerable differences between populations. The
magnitude of these differences can be measured by the additive genetic correlation …
magnitude of these differences can be measured by the additive genetic correlation …