[PDF][PDF] A conceptual framework for understanding phase separation and addressing open questions and challenges
Macromolecular phase separation is being recognized for its potential importance and
relevance as a driver of spatial organization within cells. Here, we describe a framework …
relevance as a driver of spatial organization within cells. Here, we describe a framework …
Advances in targeting 'undruggable'transcription factors with small molecules
MJ Henley, AN Koehler - Nature Reviews Drug Discovery, 2021 - nature.com
Transcription factors (TFs) represent key biological players in diseases including cancer,
autoimmunity, diabetes and cardiovascular disease. However, outside nuclear receptors …
autoimmunity, diabetes and cardiovascular disease. However, outside nuclear receptors …
Condensates formed by prion-like low-complexity domains have small-world network structures and interfaces defined by expanded conformations
M Farag, SR Cohen, WM Borcherds, A Bremer… - Nature …, 2022 - nature.com
Biomolecular condensates form via coupled associative and segregative phase transitions
of multivalent associative macromolecules. Phase separation coupled to percolation is one …
of multivalent associative macromolecules. Phase separation coupled to percolation is one …
Nuclear compartmentalization as a mechanism of quantitative control of gene expression
Gene regulation requires the dynamic coordination of hundreds of regulatory factors at
precise genomic and RNA targets. Although many regulatory factors have specific affinity for …
precise genomic and RNA targets. Although many regulatory factors have specific affinity for …
On the role of phase separation in the biogenesis of membraneless compartments
A Musacchio - The EMBO journal, 2022 - embopress.org
Molecular mechanistic biology has ushered us into the world of life's building blocks,
revealing their interactions in macromolecular complexes and inspiring strategies for …
revealing their interactions in macromolecular complexes and inspiring strategies for …
Deciphering how naturally occurring sequence features impact the phase behaviours of disordered prion-like domains
A Bremer, M Farag, WM Borcherds, I Peran… - Nature Chemistry, 2022 - nature.com
Prion-like low-complexity domains (PLCDs) have distinctive sequence grammars that
determine their driving forces for phase separation. Here we uncover the physicochemical …
determine their driving forces for phase separation. Here we uncover the physicochemical …
Evaluating phase separation in live cells: diagnosis, caveats, and functional consequences
The idea that liquid–liquid phase separation (LLPS) may be a general mechanism by which
molecules in the complex cellular milieu may self-organize has generated much excitement …
molecules in the complex cellular milieu may self-organize has generated much excitement …
Sequence-dependent surface condensation of a pioneer transcription factor on DNA
Biomolecular condensates are dense assemblies of proteins that form distinct biochemical
compartments without being surrounded by a membrane. Some, such as P granules and …
compartments without being surrounded by a membrane. Some, such as P granules and …
The transcription factor activity gradient (TAG) model: contemplating a contact-independent mechanism for enhancer–promoter communication
How distal cis-regulatory elements (eg, enhancers) communicate with promoters remains an
unresolved question of fundamental importance. Although transcription factors and cofactors …
unresolved question of fundamental importance. Although transcription factors and cofactors …
It's not just a phase: function and characteristics of RNA-binding proteins in phase separation
HJ Wiedner, J Giudice - Nature structural & molecular biology, 2021 - nature.com
Biomolecular condensates that form via phase separation are increasingly regarded as
coordinators of cellular reactions that regulate a wide variety of biological phenomena …
coordinators of cellular reactions that regulate a wide variety of biological phenomena …