RNA modifications in physiology and disease: towards clinical applications

S Delaunay, M Helm, M Frye - Nature Reviews Genetics, 2024 - nature.com
The ability of chemical modifications of single nucleotides to alter the electrostatic charge,
hydrophobic surface and base pairing of RNA molecules is exploited for the clinical use of …

The life and times of a tRNA

EM Phizicky, AK Hopper - RNA, 2023 - rnajournal.cshlp.org
The study of eukaryotic tRNA processing has given rise to an explosion of new information
and insights in the last several years. We now have unprecedented knowledge of each step …

RNA nucleotide methylation: 2021 update

Y Motorin, M Helm - Wiley Interdisciplinary Reviews: RNA, 2022 - Wiley Online Library
Among RNA modifications, transfer of methylgroups from the typical cofactor S‐adenosyl‐l‐
methionine by methyltransferases (MTases) to RNA is by far the most common reaction …

Methylated nucleosides in tRNA and tRNA methyltransferases

H Hori - Frontiers in genetics, 2014 - frontiersin.org
To date, more than 90 modified nucleosides have been found in tRNA and the biosynthetic
pathways of the majority of tRNA modifications include a methylation step (s). Recent studies …

Comprehensive sub-mitochondrial protein map of the parasitic protist Trypanosoma brucei defines critical features of organellar biology

J Pyrih, M Hammond, A Alves, S Dean, JD Sunter… - Cell reports, 2023 - cell.com
We have generated a high-confidence mitochondrial proteome (MitoTag) of the
Trypanosoma brucei procyclic stage containing 1,239 proteins. For 337 of these, a …

Inosine modifications in human tRNAs are incorporated at the precursor tRNA level

AG Torres, D Piñeyro, M Rodríguez-Escribà… - Nucleic acids …, 2015 - academic.oup.com
Transfer RNAs (tRNAs) are key adaptor molecules of the genetic code that are heavily
modified post-transcriptionally. Inosine at the first residue of the anticodon (position 34; I34) …

Malleable mitochondrion of Trypanosoma brucei

Z Verner, S Basu, C Benz, S Dixit, E Dobáková… - International review of …, 2015 - Elsevier
The importance of mitochondria for a typical aerobic eukaryotic cell is undeniable, as the list
of necessary mitochondrial processes is steadily growing. Here, we summarize the current …

TRMT5 mutations cause a defect in post-transcriptional modification of mitochondrial tRNA associated with multiple respiratory-chain deficiencies

CA Powell, R Kopajtich, AR D'Souza, J Rorbach… - The American Journal of …, 2015 - cell.com
Deficiencies in respiratory-chain complexes lead to a variety of clinical phenotypes resulting
from inadequate energy production by the mitochondrial oxidative phosphorylation system …

Diversity in mechanism and function of tRNA methyltransferases

WE Swinehart, JE Jackman - RNA biology, 2015 - Taylor & Francis
tRNA molecules undergo extensive post-transcriptional processing to generate the mature
functional tRNA species that are essential for translation in all organisms. These processing …

Absolute quantification of noncoding RNA by microscale thermophoresis

D Jacob, K Thüring, A Galliot… - Angewandte Chemie …, 2019 - Wiley Online Library
Accurate quantification of the copy numbers of noncoding RNA has recently emerged as an
urgent problem, with impact on fields such as RNA modification research, tissue …