Functions of bromodomain-containing proteins and their roles in homeostasis and cancer

T Fujisawa, P Filippakopoulos - Nature reviews Molecular cell biology, 2017 - nature.com
Bromodomains (BRDs) are evolutionarily conserved protein–protein interaction modules
that are found in a wide range of proteins with diverse catalytic and scaffolding functions and …

Biology of cancer-testis antigens and their therapeutic implications in cancer

DS Nin, LW Deng - Cells, 2023 - mdpi.com
Tumour-specific antigens have been an area of interest in cancer therapy since their
discovery in the middle of the 20th century. In the era of immune-based cancer therapeutics …

Fluorescent protein lifetimes report densities and phases of nuclear condensates during embryonic stem-cell differentiation

K Joron, JO Viegas, L Haas-Neill, S Bier, P Drori… - Nature …, 2023 - nature.com
Fluorescent proteins (FP) are frequently used for studying proteins inside cells. In advanced
fluorescence microscopy, FPs can report on additional intracellular variables. One variable …

Single-cell ATAC and RNA sequencing reveal pre-existing and persistent cells associated with prostate cancer relapse

S Taavitsainen, N Engedal, S Cao, F Handle… - Nature …, 2021 - nature.com
Prostate cancer is heterogeneous and patients would benefit from methods that stratify those
who are likely to respond to systemic therapy. Here, we employ single-cell assays for …

Developmental chromatin programs determine oncogenic competence in melanoma

A Baggiolini, SJ Callahan, E Montal, JM Weiss, T Trieu… - Science, 2021 - science.org
INTRODUCTION Tumor analyses have shown that DNA mutations can transform cells in
some situations but not in others. In melanoma, BRAFV600E [serine/threonine-protein …

Androgen receptor deregulation drives bromodomain-mediated chromatin alterations in prostate cancer

A Urbanucci, SJ Barfeld, V Kytölä, HM Itkonen… - Cell reports, 2017 - cell.com
Global changes in chromatin accessibility may drive cancer progression by reprogramming
transcription factor (TF) binding. In addition, histone acetylation readers such as …

Open chromatin, epigenetic plasticity, and nuclear organization in pluripotency

S Schlesinger, E Meshorer - Developmental Cell, 2019 - cell.com
Pluripotent embryonic stem cells (ESCs) are considered to have open and accessible
chromatin relative to differentiated cells. However, as many studies supporting these …

YAP1 maintains active chromatin state in head and neck squamous cell carcinomas that promotes tumorigenesis through cooperation with BRD4

N Chen, G Golczer, S Ghose, B Lin, A Langenbucher… - Cell reports, 2022 - cell.com
Summary Analysis of The Cancer Genome Atlas and other published data of head and neck
squamous cell carcinoma (HNSCC) reveals somatic alterations of the Hippo-YAP pathway …

AAA ATPases as therapeutic targets: Structure, functions, and small-molecule inhibitors

G Zhang, S Li, KW Cheng, TF Chou - European journal of medicinal …, 2021 - Elsevier
Abstract ATPases Associated with Diverse Cellular Activity (AAA ATPase) are essential
enzymes found in all organisms. They are involved in various processes such as DNA …

Neuroblastoma plasticity during metastatic progression stems from the dynamics of an early sympathetic transcriptomic trajectory

B Villalard, A Boltjes, F Reynaud, O Imbaud… - Nature …, 2024 - nature.com
Despite their indisputable importance in neuroblastoma (NB) pathology, knowledge of the
bases of NB plasticity and heterogeneity remains incomplete. They may be rooted in …