Bioinformatics tools for secretome analysis
Over recent years, analyses of secretomes (complete sets of secreted proteins) have been
reported in various organisms, cell types, and pathologies and such studies are quickly …
reported in various organisms, cell types, and pathologies and such studies are quickly …
Comparative genome analysis of entomopathogenic fungi reveals a complex set of secreted proteins
Background Metarhizium anisopliae is an entomopathogenic fungus used in the biological
control of some agricultural insect pests, and efforts are underway to use this fungus in the …
control of some agricultural insect pests, and efforts are underway to use this fungus in the …
Disruption of VirB6 paralogs in Anaplasma phagocytophilum attenuates its growth
FL Crosby, UG Munderloh, CM Nelson… - Journal of …, 2020 - Am Soc Microbiol
Many pathogenic bacteria translocate virulence factors into their eukaryotic hosts by means
of type IV secretion systems (T4SS) spanning the inner and outer membranes. Genes …
of type IV secretion systems (T4SS) spanning the inner and outer membranes. Genes …
In silico analysis of several signal peptides for the excretory production of reteplase in Escherichia coli
P Mousavi, Z Mostafavi-Pour, MH Morowvat… - Current …, 2017 - ingentaconnect.com
Background: Solubility of recombinant therapeutic enzymes is one of the major purpose their
production in bacterial host The factors such as metabolic system, a cellular stress response …
production in bacterial host The factors such as metabolic system, a cellular stress response …
Comparative genomics of CytR, an unusual member of the LacI family of transcription factors
NV Sernova, MS Gelfand - 2012 - journals.plos.org
CytR is a transcription regulator from the LacI family, present in some gamma-proteobacteria
including Escherichia coli and known not only for its cellular role, control of transport and …
including Escherichia coli and known not only for its cellular role, control of transport and …
Label-Free Comparative Proteomics of Differentially Expressed Mycobacterium tuberculosis Protein in Rifampicin-Related Drug-Resistant Strains
N Ullah, L Hao, JL Banga Ndzouboukou, S Chen, Y Wu… - Pathogens, 2021 - mdpi.com
Rifampicin (RIF) is one of the most important first-line anti-tuberculosis (TB) drugs, and more
than 90% of RIF-resistant (RR) Mycobacterium tuberculosis clinical isolates belong to …
than 90% of RIF-resistant (RR) Mycobacterium tuberculosis clinical isolates belong to …
Potential role of chimeric genes in pathway-related gene co-expression modules
P Li, Y Li, L Ma - World Journal of Surgical Oncology, 2021 - Springer
Background Gene fusion has epigenetic modification functions. The novel proteins encoded
by gene fusion products play a role in cancer development. Therefore, a better …
by gene fusion products play a role in cancer development. Therefore, a better …
Lipid exposure prediction enhances the inference of rotational angles of transmembrane helices
Background Since membrane protein structures are challenging to crystallize, computational
approaches are essential for elucidating the sequence-to-structure relationships. Structural …
approaches are essential for elucidating the sequence-to-structure relationships. Structural …
Decoding the disease-associated proteins encoded in the human chromosome 4
Chromosome 4 is the fourth largest chromosome, containing approximately 191 megabases
(∼ 6.4% of the human genome) with 757 protein-coding genes. A number of marker genes …
(∼ 6.4% of the human genome) with 757 protein-coding genes. A number of marker genes …
Protein secretion prediction tools and extracellular vesicles databases
Secreted proteins play important roles in several biological processes such as growth,
proliferation differentiation, cell-cell communication, migration, and apoptosis; moreover …
proliferation differentiation, cell-cell communication, migration, and apoptosis; moreover …