Engineering RNA export for measurement and manipulation of living cells

F Horns, JA Martinez, C Fan, M Haque, JM Linton… - Cell, 2023 - cell.com
A system for programmable export of RNA molecules from living cells would enable both
non-destructive monitoring of cell dynamics and engineering of cells capable of delivering …

Annotating noncoding RNA genes

S Griffiths-Jones - Annu. Rev. Genomics Hum. Genet., 2007 - annualreviews.org
Noncoding RNA genes produce a functional RNA product rather than a translated protein.
More than 1500 homologs of known “classical” RNA genes can be annotated in the human …

HIV‐1 RNA Packaging

AML Lever - Advances in pharmacology, 2007 - Elsevier
Publisher Summary This chapter focuses on the concept of human immunodeficiency virus
type 1 (HIV‐1) RNA packaging. RNA encapsidation by retroviruses is a remarkable process …

Selective and nonselective packaging of cellular RNAs in retrovirus particles

SJ Rulli Jr, CS Hibbert, J Mirro, T Pederson… - Journal of …, 2007 - Am Soc Microbiol
Assembly of retrovirus particles normally entails the selective encapsidation of viral genomic
RNA. However, in the absence of packageable viral RNA, assembly is still efficient, and the …

Host RNAs, including transposons, are encapsidated by a eukaryotic single-stranded RNA virus

A Routh, T Domitrovic… - Proceedings of the …, 2012 - National Acad Sciences
Next-generation sequencing is a valuable tool in our growing understanding of the genetic
diversity of viral populations. Using this technology, we have investigated the RNA content of …

HIV controls the selective packaging of genomic, spliced viral and cellular RNAs into virions through different mechanisms

L Houzet, JC Paillart, F Smagulova… - Nucleic acids …, 2007 - academic.oup.com
In addition to genomic RNA, HIV-1 particles package cellular and spliced viral RNAs. In
order to determine the encapsidation mechanisms of these RNAs, we determined the …

Deletions of singular U1 snRNA gene significantly interfere with transcription and 3'-end mRNA formation

M Wang, AM Liang, ZZ Zhou, TL Pang, YJ Fan… - PLoS …, 2023 - journals.plos.org
Small nuclear RNAs (snRNAs) are structural and functional cores of the spliceosome. In
metazoan genomes, each snRNA has multiple copies/variants, up to hundreds in mammals …

The host RNAs in retroviral particles

A Telesnitsky, SL Wolin - Viruses, 2016 - mdpi.com
As they assemble, retroviruses encapsidate both their genomic RNAs and several types of
host RNA. Whereas limited amounts of messenger RNA (mRNA) are detectable within virion …

Analysis of the human immunodeficiency virus-1 RNA packageome

MJ Eckwahl, H Arnion, S Kharytonchyk, T Zang… - Rna, 2016 - rnajournal.cshlp.org
All retroviruses package cellular RNAs into virions. Studies of murine leukemia virus (MLV)
revealed that the major host cell RNAs encapsidated by this simple retrovirus were LTR …

Directionality of nucleocytoplasmic transport of the retroviral gag protein depends on sequential binding of karyopherins and viral RNA

N Gudleski, JM Flanagan, EP Ryan… - Proceedings of the …, 2010 - National Acad Sciences
Retroviral Gag polyproteins coopt host factors to traffic from cytosolic ribosomes to the
plasma membrane, where virions are released. Before membrane transport, the …