Deep learning in electron microscopy

JM Ede - Machine Learning: Science and Technology, 2021 - iopscience.iop.org
Deep learning is transforming most areas of science and technology, including electron
microscopy. This review paper offers a practical perspective aimed at developers with …

Starcoder 2 and the stack v2: The next generation

A Lozhkov, R Li, LB Allal, F Cassano… - arXiv preprint arXiv …, 2024 - arxiv.org
The BigCode project, an open-scientific collaboration focused on the responsible
development of Large Language Models for Code (Code LLMs), introduces StarCoder2. In …

Formalizing UML state machines for automated verification–A survey

É André, S Liu, Y Liu, C Choppy, J Sun… - ACM Computing …, 2023 - dl.acm.org
The Unified Modeling Language (UML) is a standard for modeling dynamic systems. UML
behavioral state machines are used for modeling the dynamic behavior of object-oriented …

Why don't we share data and code? Perceived barriers and benefits to public archiving practices

DGE Gomes, P Pottier… - … of the Royal …, 2022 - royalsocietypublishing.org
The biological sciences community is increasingly recognizing the value of open,
reproducible and transparent research practices for science and society at large. Despite …

Sampling projects in github for MSR studies

O Dabic, E Aghajani, G Bavota - 2021 IEEE/ACM 18th …, 2021 - ieeexplore.ieee.org
Almost every Mining Software Repositories (MSR) study requires, as first step, the selection
of the subject software repositories. These repositories are usually collected from hosting …

Topic modeling in software engineering research

CC Silva, M Galster, F Gilson - Empirical Software Engineering, 2021 - Springer
Topic modeling using models such as Latent Dirichlet Allocation (LDA) is a text mining
technique to extract human-readable semantic “topics”(ie, word clusters) from a corpus of …

Focus: A recommender system for mining api function calls and usage patterns

PT Nguyen, J Di Rocco, D Di Ruscio… - 2019 IEEE/ACM 41st …, 2019 - ieeexplore.ieee.org
Software developers interact with APIs on a daily basis and, therefore, often face the need to
learn how to use new APIs suitable for their purposes. Previous work has shown that …

[HTML][HTML] From FAIR research data toward FAIR and open research software

W Hasselbring, L Carr, S Hettrick, H Packer… - it-Information …, 2020 - degruyter.com
Abstract The Open Science agenda holds that science advances faster when we can build
on existing results. Therefore, research data must be FAIR (Findable, Accessible …

MDverse, shedding light on the dark matter of molecular dynamics simulations

JKS Tiemann, M Szczuka, L Bouarroudj, M Oussaren… - Elife, 2024 - elifesciences.org
The rise of open science and the absence of a global dedicated data repository for
molecular dynamics (MD) simulations has led to the accumulation of MD files in generalist …

Are the dead taking over Facebook? A Big Data approach to the future of death online

CJ Öhman, D Watson - Big Data & Society, 2019 - journals.sagepub.com
We project the future accumulation of profiles belonging to deceased Facebook users. Our
analysis suggests that a minimum of 1.4 billion users will pass away before 2100 if …