[HTML][HTML] Human papillomavirus genome variants

RD Burk, A Harari, Z Chen - Virology, 2013 - Elsevier
Amongst the human papillomaviruses (HPVs), the genus Alphapapillomavirus contains HPV
types that are uniquely pathogenic. They can be classified into species and types based on …

[HTML][HTML] Animal papillomaviruses

A Rector, M Van Ranst - Virology, 2013 - Elsevier
We provide an overview of the host range, taxonomic classification and genomic diversity of
animal papillomaviruses. The complete genomes of 112 non-human papillomavirus types …

The Papillomavirus Episteme: a major update to the papillomavirus sequence database

K Van Doorslaer, Z Li, S Xirasagar, P Maes… - Nucleic acids …, 2017 - academic.oup.com
Abstract The Papillomavirus Episteme (PaVE) is a database of curated papillomavirus
genomic sequences, accompanied by web-based sequence analysis tools. This update …

Inadvertent human genomic bycatch and intentional capture raise beneficial applications and ethical concerns with environmental DNA

L Whitmore, M McCauley, JA Farrell… - Nature Ecology & …, 2023 - nature.com
The field of environmental DNA (eDNA) is advancing rapidly, yet human eDNA applications
remain underutilized and underconsidered. Broader adoption of eDNA analysis will produce …

[HTML][HTML] Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments

HU Bernard, RD Burk, Z Chen, K Van Doorslaer… - Virology, 2010 - Elsevier
We present an expansion of the classification of the family Papillomaviridae, which now
contains 29 genera formed by 189 papillomavirus (PV) types isolated from humans (120 …

Viruses infecting reptiles

RE Marschang - Viruses, 2011 - mdpi.com
A large number of viruses have been described in many different reptiles. These viruses
include arboviruses that primarily infect mammals or birds as well as viruses that are specific …

Analyses of evolutionary dynamics in viruses are hindered by a time-dependent bias in rate estimates

S Duchêne, EC Holmes… - Proceedings of the …, 2014 - royalsocietypublishing.org
Time-scales of viral evolution and emergence have been studied widely, but are often poorly
understood. Molecular analyses of viral evolutionary time-scales generally rely on estimates …

Evolution and taxonomic classification of human papillomavirus 16 (HPV16)-related variant genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67

Z Chen, M Schiffman, R Herrero, R DeSalle, K Anastos… - PloS one, 2011 - journals.plos.org
Background Human papillomavirus 16 (HPV16) species group (alpha-9) of the
Alphapapillomavirus genus contains HPV16, HPV31, HPV33, HPV35, HPV52, HPV58 and …

Viruses in reptiles

E Ariel - Veterinary Research, 2011 - Springer
The etiology of reptilian viral diseases can be attributed to a wide range of viruses occurring
across different genera and families. Thirty to forty years ago, studies of viruses in reptiles …

Human papillomavirus genomics: past, present and future

A Harari, Z Chen, RD Burk - Human papillomavirus, 2014 - karger.com
Human papillomaviruses (HPV) are a group of divergent DNA viruses, of which a select few
evolutionarily related HPVs have emerged to be highly oncogenic and of significant medical …