[HTML][HTML] From diversity to complexity: Microbial networks in soils

K Guseva, S Darcy, E Simon, LV Alteio… - Soil Biology and …, 2022 - Elsevier
Network analysis has been used for many years in ecological research to analyze
organismal associations, for example in food webs, plant-plant or plant-animal interactions …

Analysing ecological networks of species interactions

E Delmas, M Besson, MH Brice, LA Burkle… - Biological …, 2019 - Wiley Online Library
Network approaches to ecological questions have been increasingly used, particularly in
recent decades. The abstraction of ecological systems–such as communities–through …

Ecological networks across environmental gradients

JM Tylianakis, RJ Morris - Annual Review of Ecology, Evolution …, 2017 - annualreviews.org
Ecological networks have a long history in ecology, and a recent increase in network
analyses across environmental gradients has revealed important changes in their structure …

The emerging science of linked plant–fungal invasions

IA Dickie, JL Bufford, RC Cobb… - New …, 2017 - Wiley Online Library
Invasions of alien plants are typically studied as invasions of individual species, yet
interactions between plants and symbiotic fungi (mutualists and potential pathogens) affect …

Foundation species, non-trophic interactions, and the value of being common

AM Ellison - Iscience, 2019 - cell.com
Foundation species define ecosystems, control the biological diversity of associated
species, modulate critical ecosystem processes, and often have important cultural values …

Resolving food-web structure

RM Pringle, MC Hutchinson - Annual Review of Ecology …, 2020 - annualreviews.org
Food webs are a major focus and organizing theme of ecology, but the data used to
assemble them are deficient. Early debates over food-web data focused on taxonomic …

Biotic interactions hold the key to understanding metacommunity organisation

J García‐Girón, J Heino, F García‐Criado… - …, 2020 - Wiley Online Library
Biotic interactions are fundamental drivers governing biodiversity locally, yet their effects on
geographical variation in community composition (ie incidence‐based) and community …

Fertilizing-induced alterations of microbial functional profiles in soil nitrogen cycling closely associate with crop yield

R Li, C Ren, L Wu, X Zhang, X Mao, Z Fan, W Cui… - Environmental …, 2023 - Elsevier
Fertilization and rhizosphere selection are key regulators for soil nitrogen (N) cycling and
microbiome. Thus, clarifying how the overall N cycling processes and soil microbiome …

Biomonitoring for the 21st century: integrating next-generation sequencing into ecological network analysis

SAP Derocles, DA Bohan, AJ Dumbrell… - Advances in ecological …, 2018 - Elsevier
Ecological network analysis (ENA) provides a mechanistic framework for describing
complex species interactions, quantifying ecosystem services, and examining the impacts of …

Network analysis: ten years shining light on host–parasite interactions

R Runghen, R Poulin, C Monlleó-Borrull… - Trends in …, 2021 - cell.com
Biological interactions are key drivers of ecological and evolutionary processes. The
complexity of such interactions hinders our understanding of ecological systems and our …