Functional aptamers and aptazymes in biotechnology, diagnostics, and therapy
Aptamers are single-stranded nucleic acid molecules that possess properties comparable to
those of protein monoclonal antibodies, and thus are clear alternatives to long established …
those of protein monoclonal antibodies, and thus are clear alternatives to long established …
RNA synthetic biology
FJ Isaacs, DJ Dwyer, JJ Collins - Nature biotechnology, 2006 - nature.com
RNA molecules play important and diverse regulatory roles in the cell by virtue of their
interaction with other nucleic acids, proteins and small molecules. Inspired by this natural …
interaction with other nucleic acids, proteins and small molecules. Inspired by this natural …
Versatile RNA-sensing transcriptional regulators for engineering genetic networks
The widespread natural ability of RNA to sense small molecules and regulate genes has
become an important tool for synthetic biology in applications as diverse as environmental …
become an important tool for synthetic biology in applications as diverse as environmental …
De novo design of a synthetic riboswitch that regulates transcription termination
M Wachsmuth, S Findeiß, N Weissheimer… - Nucleic acids …, 2013 - academic.oup.com
Riboswitches are regulatory RNA elements typically located in the 5′-untranslated region
of certain mRNAs and control gene expression at the level of transcription or translation …
of certain mRNAs and control gene expression at the level of transcription or translation …
Rapidly characterizing the fast dynamics of RNA genetic circuitry with cell-free transcription–translation (TX-TL) systems
MK Takahashi, J Chappell, CA Hayes… - ACS synthetic …, 2015 - ACS Publications
RNA regulators are emerging as powerful tools to engineer synthetic genetic networks or
rewire existing ones. A potential strength of RNA networks is that they may be able to …
rewire existing ones. A potential strength of RNA networks is that they may be able to …
[HTML][HTML] Engineered riboswitches: expanding researchers' toolbox with synthetic RNA regulators
A Wittmann, B Suess - FEBS letters, 2012 - Elsevier
Riboswitches are natural RNA-based genetic switches that sense small-molecule
metabolites and regulate in response the expression of the corresponding metabolic genes …
metabolites and regulate in response the expression of the corresponding metabolic genes …
Selection of an improved RNA polymerase ribozyme with superior extension and fidelity
Our current understanding of biology suggests that early life relied predominantly on RNA
for catalysis and replication. Here, we report the isolation of an RNA polymerase ribozyme …
for catalysis and replication. Here, we report the isolation of an RNA polymerase ribozyme …
saRNA-guided Ago2 targets the RITA complex to promoters to stimulate transcription
V Portnoy, SHS Lin, KH Li, A Burlingame, ZH Hu, H Li… - Cell research, 2016 - nature.com
Small activating RNAs (saRNAs) targeting specific promoter regions are able to stimulate
gene expression at the transcriptional level, a phenomenon known as RNA activation …
gene expression at the transcriptional level, a phenomenon known as RNA activation …
Directed evolution: selecting today's biocatalysts
LG Otten, WJ Quax - Biomolecular engineering, 2005 - Elsevier
Directed evolution has become a full-grown tool in molecular biology nowadays. The
methods that are involved in creating a mutant library are extensive and can be divided into …
methods that are involved in creating a mutant library are extensive and can be divided into …
A modular strategy for engineering orthogonal chimeric RNA transcription regulators
MK Takahashi, JB Lucks - Nucleic acids research, 2013 - academic.oup.com
Antisense RNA transcription attenuators are a key component of the synthetic biology
toolbox, with their ability to serve as building blocks for both signal integration logic circuits …
toolbox, with their ability to serve as building blocks for both signal integration logic circuits …