Crop phenomics and high-throughput phenotyping: past decades, current challenges, and future perspectives

W Yang, H Feng, X Zhang, J Zhang, JH Doonan… - Molecular plant, 2020 - cell.com
Since whole-genome sequencing of many crops has been achieved, crop functional
genomics studies have stepped into the big-data and high-throughput era. However …

Advancements and prospects of genome-wide association studies (GWAS) in maize

JH Sahito, H Zhang, ZGN Gishkori, C Ma… - International Journal of …, 2024 - mdpi.com
Genome-wide association studies (GWAS) have emerged as a powerful tool for unraveling
intricate genotype–phenotype association across various species. Maize (Zea mays L.) …

Multiple integrated root phenotypes are associated with improved drought tolerance

SP Klein, HM Schneider, AC Perkins… - Plant …, 2020 - academic.oup.com
To test the hypothesis that multiple integrated root phenotypes would co-optimize drought
tolerance, we phenotyped the root anatomy and architecture of 400 mature maize (Zea …

Root angle in maize influences nitrogen capture and is regulated by calcineurin B‐like protein (CBL)‐interacting serine/threonine‐protein kinase 15 (ZmCIPK15)

HM Schneider, VSN Lor, MT Hanlon… - Plant, Cell & …, 2022 - Wiley Online Library
Crops with reduced nutrient and water requirements are urgently needed in global
agriculture. Root growth angle plays an important role in nutrient and water acquisition. A …

Genetic control of photoprotection and photosystem II operating efficiency in plants

S Sahay, M Grzybowski, JC Schnable… - New …, 2023 - Wiley Online Library
Photoprotection against excess light via nonphotochemical quenching (NPQ) is
indispensable for plant survival. However, slow NPQ relaxation under low light conditions …

A common resequencing‐based genetic marker data set for global maize diversity

MW Grzybowski, RV Mural, G Xu, J Turkus… - The Plant …, 2023 - Wiley Online Library
Maize (Zea mays ssp. mays) populations exhibit vast ranges of genetic and phenotypic
diversity. As sequencing costs have declined, an increasing number of projects have sought …

A leaf-level spectral library to support high-throughput plant phenotyping: predictive accuracy and model transfer

NK Wijewardane, H Zhang, J Yang… - Journal of …, 2023 - academic.oup.com
Leaf-level hyperspectral reflectance has become an effective tool for high-throughput
phenotyping of plant leaf traits due to its rapid, low-cost, multi-sensing, and non-destructive …

Genome-wide association study and its applications in the non-model crop Sesamum indicum

M Berhe, K Dossa, J You, PA Mboup, IN Diallo… - BMC Plant …, 2021 - Springer
Background Sesame is a rare example of non-model and minor crop for which numerous
genetic loci and candidate genes underlying features of interest have been disclosed at …

A genome-wide association study identifies genes associated with cuticular wax metabolism in maize

L Xu, J Hao, M Lv, P Liu, Q Ge, S Zhang… - Plant …, 2024 - academic.oup.com
The plant cuticle is essential in plant defense against biotic and abiotic stresses. To
systematically elucidate the genetic architecture of maize (Zea mays L.) cuticular wax …

Genetic control of root architectural plasticity in maize

HM Schneider, SP Klein, MT Hanlon… - Journal of …, 2020 - academic.oup.com
Root phenotypes regulate soil resource acquisition; however, their genetic control and
phenotypic plasticity are poorly understood. We hypothesized that the responses of root …