Global identification of SWI/SNF targets reveals compensation by EP400
BJE Martin, EF Ablondi, C Goglia, CA Mimoso… - Cell, 2023 - cell.com
Mammalian SWI/SNF chromatin remodeling complexes move and evict nucleosomes at
gene promoters and enhancers to modulate DNA access. Although SWI/SNF subunits are …
gene promoters and enhancers to modulate DNA access. Although SWI/SNF subunits are …
[HTML][HTML] Human SMARCA5 is continuously required to maintain nucleosome spacing
Genetic models suggested that SMARCA5 was required for DNA-templated events including
transcription, DNA replication, and DNA repair. We engineered a degron tag into the …
transcription, DNA replication, and DNA repair. We engineered a degron tag into the …
Regulation of chromatin organization during animal regeneration
X Jia, W Lin, W Wang - Cell Regeneration, 2023 - Springer
Activation of regeneration upon tissue damages requires the activation of many
developmental genes responsible for cell proliferation, migration, differentiation, and tissue …
developmental genes responsible for cell proliferation, migration, differentiation, and tissue …
The regulation of totipotency transcription: Perspective from in vitro and in vivo totipotency
H Xu, H Liang - Frontiers in Cell and Developmental Biology, 2022 - frontiersin.org
Totipotency represents the highest developmental potency. By definition, totipotent stem
cells are capable of giving rise to all embryonic and extraembryonic cell types. In …
cells are capable of giving rise to all embryonic and extraembryonic cell types. In …
Functional dissection of PRC1 subunits RYBP and YAF2 during neural differentiation of embryonic stem cells
Y Liu, G Hu, S Yang, M Yao, Z Liu, C Yan… - Nature …, 2023 - nature.com
Abstract Polycomb repressive complex 1 (PRC1) comprises two different complexes: CBX-
containing canonical PRC1 (cPRC1) and RYBP/YAF2-containing variant PRC1 (vPRC1) …
containing canonical PRC1 (cPRC1) and RYBP/YAF2-containing variant PRC1 (vPRC1) …
The PTM profiling of CTCF reveals the regulation of 3D chromatin structure by O-GlcNAcylation
Abstract CCCTC-binding factor (CTCF), a ubiquitously expressed and highly conserved
protein, is known to play a critical role in chromatin structure. Post-translational modifications …
protein, is known to play a critical role in chromatin structure. Post-translational modifications …
CTCF mutation at R567 causes developmental disorders via 3D genome rearrangement and abnormal neurodevelopment
J Zhang, G Hu, Y Lu, H Ren, Y Huang, Y Wen… - Nature …, 2024 - nature.com
The three-dimensional genome structure organized by CTCF is required for development.
Clinically identified mutations in CTCF have been linked to adverse developmental …
Clinically identified mutations in CTCF have been linked to adverse developmental …
The esBAF and ISWI nucleosome remodeling complexes influence occupancy of overlapping dinucleosomes and fragile nucleosomes in murine embryonic stem cells
Background Nucleosome remodeling factors regulate the occupancy and positioning of
nucleosomes genome-wide through ATP-driven DNA translocation. While many …
nucleosomes genome-wide through ATP-driven DNA translocation. While many …
Multiomic analysis of cohesin reveals that ZBTB transcription factors contribute to chromatin interactions
R Wang, Q Xu, C Wang, K Tian, H Wang… - Nucleic Acids …, 2023 - academic.oup.com
One bottleneck in understanding the principles of 3D chromatin structures is caused by the
paucity of known regulators. Cohesin is essential for 3D chromatin organization, and its …
paucity of known regulators. Cohesin is essential for 3D chromatin organization, and its …
A tracheal aspirate-derived airway basal cell model reveals a proinflammatory epithelial defect in congenital diaphragmatic hernia
Rationale: Congenital diaphragmatic hernia (CDH) is characterized by incomplete closure of
the diaphragm and lung hypoplasia. The pathophysiology of lung defects in CDH is poorly …
the diaphragm and lung hypoplasia. The pathophysiology of lung defects in CDH is poorly …