Bioengineering approaches for the advanced organoid research
Recent advances in 3D cell culture technology have enabled scientists to generate stem cell
derived organoids that recapitulate the structural and functional characteristics of native …
derived organoids that recapitulate the structural and functional characteristics of native …
Retinal organoids: a window into human retinal development
M O'Hara-Wright, A Gonzalez-Cordero - Development, 2020 - journals.biologists.com
Retinal development and maturation are orchestrated by a series of interacting signalling
networks that drive the morphogenetic transformation of the anterior developing brain …
networks that drive the morphogenetic transformation of the anterior developing brain …
Transfer learning enables predictions in network biology
Mapping gene networks requires large amounts of transcriptomic data to learn the
connections between genes, which impedes discoveries in settings with limited data …
connections between genes, which impedes discoveries in settings with limited data …
[HTML][HTML] Cell types of the human retina and its organoids at single-cell resolution
CS Cowan, M Renner, M De Gennaro, B Gross-Scherf… - Cell, 2020 - cell.com
Human organoids recapitulating the cell-type diversity and function of their target organ are
valuable for basic and translational research. We developed light-sensitive human retinal …
valuable for basic and translational research. We developed light-sensitive human retinal …
[HTML][HTML] Human brain organoids assemble functionally integrated bilateral optic vesicles
E Gabriel, W Albanna, G Pasquini, A Ramani… - Cell stem cell, 2021 - cell.com
During embryogenesis, optic vesicles develop from the diencephalon via a multistep
process of organogenesis. Using induced pluripotent stem cell (iPSC)-derived human brain …
process of organogenesis. Using induced pluripotent stem cell (iPSC)-derived human brain …
Single-cell analysis of human retina identifies evolutionarily conserved and species-specific mechanisms controlling development
The development of single-cell RNA sequencing (scRNA-seq) has allowed high-resolution
analysis of cell-type diversity and transcriptional networks controlling cell-fate specification …
analysis of cell-type diversity and transcriptional networks controlling cell-fate specification …
Cell atlas of the human fovea and peripheral retina
Most irreversible blindness results from retinal disease. To advance our understanding of
the etiology of blinding diseases, we used single-cell RNA-sequencing (scRNA-seq) to …
the etiology of blinding diseases, we used single-cell RNA-sequencing (scRNA-seq) to …
Gruffi: an algorithm for computational removal of stressed cells from brain organoid transcriptomic datasets
Á Vértesy, OL Eichmüller, J Naas… - The EMBO …, 2022 - embopress.org
Organoids enable in vitro modeling of complex developmental processes and disease
pathologies. Like most 3D cultures, organoids lack sufficient oxygen supply and therefore …
pathologies. Like most 3D cultures, organoids lack sufficient oxygen supply and therefore …
[HTML][HTML] Single-cell ATAC-seq of fetal human retina and stem-cell-derived retinal organoids shows changing chromatin landscapes during cell fate acquisition
We previously used single-cell transcriptomic analysis to characterize human fetal retinal
development and assessed the degree to which retinal organoids recapitulate normal …
development and assessed the degree to which retinal organoids recapitulate normal …
[HTML][HTML] Extension of retinofugal projections in an assembled model of human pluripotent stem cell-derived organoids
CM Fligor, SS Lavekar, J Harkin, PK Shields… - Stem Cell Reports, 2021 - cell.com
The development of the visual system involves the coordination of spatial and temporal
events to specify the organization of varied cell types, including the elongation of axons from …
events to specify the organization of varied cell types, including the elongation of axons from …