Phyllosphere epiphytic and endophytic fungal community and network structures differ in a tropical mangrove ecosystem

H Yao, X Sun, C He, P Maitra, XC Li, LD Guo - Microbiome, 2019 - Springer
Background Revealing the relationship between plants and fungi is very important in
understanding biodiversity maintenance, community stability, and ecosystem functioning …

Indirect effects drive coevolution in mutualistic networks

PR Guimaraes Jr, MM Pires, P Jordano, J Bascompte… - Nature, 2017 - nature.com
Ecological interactions have been acknowledged to play a key role in shaping biodiversity,.
Yet a major challenge for evolutionary biology is to understand the role of ecological …

A method for detecting modules in quantitative bipartite networks

CF Dormann, R Strauss - Methods in Ecology and Evolution, 2014 - Wiley Online Library
Ecological networks are often composed of different subcommunities (often referred to as
modules). Identifying such modules has the potential to develop a better understanding of …

Accelerating homogenization of the global plant–frugivore meta-network

EC Fricke, JC Svenning - Nature, 2020 - nature.com
Introductions of species by humans are causing the homogenization of species composition
across biogeographic barriers,–. The ecological and evolutionary consequences of …

Cancer-mutation network and the number and specificity of driver mutations

J Iranzo, I Martincorena… - Proceedings of the …, 2018 - National Acad Sciences
Cancer genomics has produced extensive information on cancer-associated genes, but the
number and specificity of cancer-driver mutations remains a matter of debate. We …

The double-stranded DNA virosphere as a modular hierarchical network of gene sharing

J Iranzo, M Krupovic, EV Koonin - MBio, 2016 - Am Soc Microbiol
Virus genomes are prone to extensive gene loss, gain, and exchange and share no
universal genes. Therefore, in a broad-scale study of virus evolution, gene and genome …

Assembly of complex plant–fungus networks

H Toju, PR Guimaraes, JM Olesen… - Nature …, 2014 - nature.com
Species in ecological communities build complex webs of interaction. Although revealing
the architecture of these networks is fundamental to understanding ecological and …

High-throughput DNA barcoding for ecological network studies

H Toju - Population Ecology, 2015 - Springer
The network theoretical framework of ecological community studies is expected to promote
not only the basic understanding of ecological and coevolutionary dynamics but also the …

The human touch: a meta-analysis of anthropogenic effects on plant-pollinator interaction networks

K López-Vázquez, C Lara, P Corcuera… - PeerJ, 2024 - peerj.com
Background Anthropogenic activities significantly impact natural ecosystems, leading to
alterations in plant and pollinator diversity and abundance. These changes often result in …

Exposing the structure of an Arctic food web

HK Wirta, EJ Vesterinen, PA Hambäck… - Ecology and …, 2015 - Wiley Online Library
How food webs are structured has major implications for their stability and dynamics. While
poorly studied to date, arctic food webs are commonly assumed to be simple in structure …