Predictions of the ADMET properties of candidate drug molecules utilizing different QSAR/QSPR modelling approaches

M Tareq Hassan Khan - Current drug metabolism, 2010 - ingentaconnect.com
The integration of early ADMET (absorption, distribution, metabolism, excretion and toxicity)
profiling, or simply prediction, of'lead'molecules to speed-up the'lead'selection further for …

General theory for multiple input-output perturbations in complex molecular systems. 1. Linear QSPR electronegativity models in physical, organic, and medicinal …

H Gonzalez-Diaz, S Arrasate… - Current topics in …, 2013 - ingentaconnect.com
In general perturbation methods starts with a known exact solution of a problem and add
“small” variation terms in order to approach to a solution for a related problem without known …

Design, synthesis and biological evaluation of 1, 3, 4-oxadiazole derivatives

KK Jha, A Samad, Y Kumar, M Shaharyar… - European Journal of …, 2010 - Elsevier
3D QSAR analysis for the 21 molecules of 1, 3, 4-oxadiazoles was carried out by using k-
Nearest Neighbor Molecular Field Analysis (kNN-MFA) combined with various selection …

PTML combinatorial model of ChEMBL compounds assays for multiple types of cancer

H Bediaga, S Arrasate… - ACS Combinatorial …, 2018 - ACS Publications
Determining the target proteins of new anticancer compounds is a very important task in
Medicinal Chemistry. In this sense, chemists carry out preclinical assays with a high number …

PTML Model for Proteome Mining of B-Cell Epitopes and Theoretical–Experimental Study of Bm86 Protein Sequences from Colima, Mexico

SG Martinez-Arzate, E Tenorio-Borroto… - Journal of proteome …, 2017 - ACS Publications
In this work, we developed a general perturbation theory and machine learning method for
data mining of proteomes to discover new B-cell epitopes useful for vaccine design. The …

MIND-BEST: Web Server for Drugs and Target Discovery; Design, Synthesis, and Assay of MAO-B Inhibitors and Theoretical− Experimental Study of G3PDH Protein …

H González-Díaz, F Prado-Prado… - Journal of proteome …, 2011 - ACS Publications
Many drugs with very different affinity to a large number of receptors are described. Thus, in
this work, we selected drug− target pairs (DTPs/nDTPs) of drugs with high affinity/nonaffinity …

Perturbation Theory/Machine Learning Model of ChEMBL Data for Dopamine Targets: Docking, Synthesis, and Assay of New l-Prolyl-l-leucyl-glycinamide …

J Ferreira da Costa, D Silva, O Caamaño… - ACS Chemical …, 2018 - ACS Publications
Predicting drug–protein interactions (DPIs) for target proteins involved in dopamine
pathways is a very important goal in medicinal chemistry. We can tackle this problem using …

Review of MARCH-INSIDE & complex networks prediction of drugs: ADMET, anti-parasite activity, metabolizing enzymes and cardiotoxicity proteome biomarkers

H Gonzalez-Diaz, A Duardo-Sanchez… - Current drug …, 2010 - ingentaconnect.com
In this communication we carry out an in-depth review of a very versatile QSPR-like method.
The method name is MARCH-INSIDE (MARkov CHains Ivariants for Network Selection and …

Multioutput perturbation-theory machine learning (PTML) model of ChEMBL data for antiretroviral compounds

E Vásquez-Domínguez… - Molecular …, 2019 - ACS Publications
Retroviral infections, such as HIV, are, until now, diseases with no cure. Medicine and
pharmaceutical chemistry need and consider it a huge goal to define target proteins of new …

Computational analysis of amino acid mutation: a proteome wide perspective

J Chen, B Shen - Current Proteomics, 2009 - ingentaconnect.com
Amino acid mutations may have diverse effects on protein structure and function. Thus
reliable information about the protein sequence variations is essential to gain insights into …