[HTML][HTML] Applications of single-cell sequencing in cancer research: progress and perspectives
Y Lei, R Tang, J Xu, W Wang, B Zhang, J Liu… - Journal of hematology & …, 2021 - Springer
Single-cell sequencing, including genomics, transcriptomics, epigenomics, proteomics and
metabolomics sequencing, is a powerful tool to decipher the cellular and molecular …
metabolomics sequencing, is a powerful tool to decipher the cellular and molecular …
[HTML][HTML] Eleven grand challenges in single-cell data science
The recent boom in microfluidics and combinatorial indexing strategies, combined with low
sequencing costs, has empowered single-cell sequencing technology. Thousands—or even …
sequencing costs, has empowered single-cell sequencing technology. Thousands—or even …
Autism genes converge on asynchronous development of shared neuron classes
B Paulsen, S Velasco, AJ Kedaigle, M Pigoni… - Nature, 2022 - nature.com
Genetic risk for autism spectrum disorder (ASD) is associated with hundreds of genes
spanning a wide range of biological functions,,,,–. The alterations in the human brain …
spanning a wide range of biological functions,,,,–. The alterations in the human brain …
[HTML][HTML] Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression
Recent developments in stem cell biology have enabled the study of cell fate decisions in
early human development that are impossible to study in vivo. However, understanding how …
early human development that are impossible to study in vivo. However, understanding how …
[HTML][HTML] Single-cell transcriptomics identifies an effectorness gradient shaping the response of CD4+ T cells to cytokines
E Cano-Gamez, B Soskic, TI Roumeliotis, E So… - Nature …, 2020 - nature.com
Naïve CD4+ T cells coordinate the immune response by acquiring an effector phenotype in
response to cytokines. However, the cytokine responses in memory T cells remain largely …
response to cytokines. However, the cytokine responses in memory T cells remain largely …
Computational methods for single-cell omics across modalities
M Efremova, SA Teichmann - Nature methods, 2020 - nature.com
Single-cell omics approaches provide high-resolution data on cellular phenotypes,
developmental dynamics and communication networks in diverse tissues and conditions …
developmental dynamics and communication networks in diverse tissues and conditions …
[HTML][HTML] Vireo: Bayesian demultiplexing of pooled single-cell RNA-seq data without genotype reference
Multiplexed single-cell RNA-seq analysis of multiple samples using pooling is a promising
experimental design, offering increased throughput while allowing to overcome batch …
experimental design, offering increased throughput while allowing to overcome batch …
[HTML][HTML] Single-cell transcriptomics: current methods and challenges in data acquisition and analysis
Rapid cost drops and advancements in next-generation sequencing have made profiling of
cells at individual level a conventional practice in scientific laboratories worldwide. Single …
cells at individual level a conventional practice in scientific laboratories worldwide. Single …
Applications of single-cell DNA sequencing
Over the past decade, genomic analyses of single cells—the fundamental units of life—have
become possible. Single-cell DNA sequencing has shed light on biological questions that …
become possible. Single-cell DNA sequencing has shed light on biological questions that …
[PDF][PDF] Clonally resolved single-cell multi-omics identifies routes of cellular differentiation in acute myeloid leukemia
S Beneyto-Calabuig, AK Merbach, JA Kniffka, M Antes… - Cell Stem Cell, 2023 - cell.com
Inter-patient variability and the similarity of healthy and leukemic stem cells (LSCs) have
impeded the characterization of LSCs in acute myeloid leukemia (AML) and their …
impeded the characterization of LSCs in acute myeloid leukemia (AML) and their …