A beginner's guide to low‐coverage whole genome sequencing for population genomics

RN Lou, A Jacobs, AP Wilder… - Molecular …, 2021 - Wiley Online Library
Low‐coverage whole genome sequencing (lcWGS) has emerged as a powerful and cost‐
effective approach for population genomic studies in both model and nonmodel species …

Does fishing dismantle fish culture and ecosystem structure? Questions about the implications of social learning among fish and fishers

JA Wilson, J Giske - Fish and Fisheries, 2023 - Wiley Online Library
Scientific awareness of social learning, especially among vertebrates, has expanded rapidly
in recent decades. That literature suggests that social learning may be a second adaptive …

Genomic analysis reveals neutral and adaptive patterns that challenge the current management regime for East Atlantic cod Gadus morhua L

T Johansen, F Besnier, M Quintela… - Evolutionary …, 2020 - Wiley Online Library
Challenging long‐held perceptions of fish management units can help to protect vulnerable
stocks. When a fishery consisting of multiple genetic stocks is managed as a single unit …

Novel signals of adaptive genetic variation in northwestern Atlantic cod revealed by whole‐genome sequencing

GV Clucas, RN Lou, NO Therkildsen… - Evolutionary …, 2019 - Wiley Online Library
Selection can create complex patterns of adaptive differentiation among populations in the
wild that may be relevant to management. Atlantic cod in the Northwest Atlantic are at a …

Current and forthcoming approaches for benchmarking genetic and genomic diversity

NC García, WD Robinson - Frontiers in Ecology and Evolution, 2021 - frontiersin.org
The current attrition of biodiversity extends beyond loss of species and unique populations
to steady loss of a vast genomic diversity that remains largely undescribed. Yet the …

Management and conservation implications of cryptic population substructure for two commercially exploited fishes (Merluccius spp.) in southern Africa

S Forde, S von der Heyden, A Le Moan… - Molecular Ecology …, 2023 - Wiley Online Library
Genomic information can aid in the establishment of sustainable management plans for
commercially exploited marine fishes, aiding in the long‐term conservation of these …

A nanopore based chromosome-level assembly representing Atlantic cod from the Celtic Sea

TG Kirubakaran, Ø Andersen, M Moser… - G3: Genes …, 2020 - academic.oup.com
Currently available genome assemblies for Atlantic cod (Gadus morhua) have been
constructed from fish belonging to the Northeast Arctic Cod (NEAC) population; a migratory …

Stock identification of sympatric Atlantic cod populations in the Gulf of Maine and mixed stock fishery analysis using otolith-based techniques

LA Kerr, Z Whitener, S Becker… - Canadian Journal of …, 2024 - cdnsciencepub.com
Sympatric populations of Atlantic cod with distinct spawning times in winter and spring have
been identified within the Gulf of Maine. A new western Gulf of Maine stock assessment unit …

SNP genotyping reveals substructuring in weakly differentiated populations of Atlantic cod (Gadus morhua) from diverse environments in the Baltic Sea

R Wenne, R Bernaś, A Kijewska, A Poćwierz-Kotus… - Scientific Reports, 2020 - nature.com
Atlantic cod (Gadus morhua) is one of the most important fish species in northern Europe for
several reasons including its predator status in marine ecosystems, its historical role in …

Low‐coverage whole‐genome sequencing reveals molecular markers for spawning season and sex identification in Gulf of Maine Atlantic cod (Gadus morhua …

TP O'Donnell, TJ Sullivan - Ecology and Evolution, 2021 - Wiley Online Library
Abstract Atlantic cod (Gadus morhua, Linnaeus 1758) in the western Gulf of Maine are
managed as a single stock despite several lines of evidence supporting two spawning …