From DNA to protein: Why genetic code context of nucleotides for DNA signal processing? A review

M Ahmad, LT Jung, AA Bhuiyan - Biomedical Signal Processing and …, 2017 - Elsevier
Protein coding regions are commonly diffused with non-coding regions due to 1/f
background noise in such a way that a viable discernment between the two regions …

Deep transfer learning for automated liver cancer gene recognition using spectrogram images of digitized DNA sequences

B Das, S Toraman - Biomedical Signal Processing and Control, 2022 - Elsevier
DNA biomarkers are considered to be an important diagnostic factor for early detection of
cancer. With the development of technology, many machine learning methods have been …

[PDF][PDF] Genomic analysis and classification of exon and intron sequences using DNA numerical mapping techniques

M Abo-Zahhad, SM Ahmed… - International Journal of …, 2012 - Citeseer
Using digital signal processing in genomic field is a key of solving most problems in this
area such as prediction of gene locations in a genomic sequence and identifying the defect …

A novel numerical mapping method based on entropy for digitizing DNA sequences

B Das, I Turkoglu - Neural Computing and Applications, 2018 - Springer
Recently, digital signal processing has been widely applied in the study of genomics. One of
the genomic studies is identification of protein-coding regions. Where is a protein coded …

A deep learning model for identification of diabetes type 2 based on nucleotide signals

B Das - Neural Computing and Applications, 2022 - Springer
Abstract In Genome-Wide Association Studies (GWAS), detection of T2D-related variants in
genome sequences and accurate modeling of the complex structure of the relevant gene are …

A novel genome analysis method with the entropy-based numerical techniqueusing pretrained convolutional neural networks

B DAŞ, S Toraman… - Turkish Journal of Electrical …, 2020 - journals.tubitak.gov.tr
The identification of DNA sequences as exon and intron is a common problem in genome
analysis. The methods used for feature extraction and mapping techniques for the …

Polyphase filtering with variable mapping rule in protein coding region prediction

S Singha Roy, S Barman - Microsystem Technologies, 2017 - Springer
Genomic researches are concerned with the study of genomes of organisms. It has become
a challenge to the researchers to identify the segments within the DNA sequence that …

On fuzzy semantic similarity measure for DNA coding

M Ahmad, LT Jung, MAA Bhuiyan - Computers in biology and medicine, 2016 - Elsevier
A coding measure scheme numerically translates the DNA sequence to a time domain
signal for protein coding regions identification. A number of coding measure schemes based …

[PDF][PDF] A novel optimized approach for gene identification in DNA sequences

M Ahmad, A Azween, K Buragga - Journal of Applied Sciences, 2011 - researchgate.net
Gene identification is an open optimization problem in Bioinformatics. Exponential growth of
biological data needs efficient methods for protein translation. Several approaches have …

[PDF][PDF] A novel circular mapping technique for spectral classification of exons and introns in human DNA sequences

M Abo-Zahhad, SM Ahmed… - Int. J. Inf. Technol …, 2014 - academia.edu
Signals that represent information may be classified into two forms: numeric and symbolic.
Symbolic signals such as DNA symbolic sequences cannot be directly processed with digital …