Mechanochemical principles of spatial and temporal patterns in cells and tissues

A Bailles, EW Gehrels, T Lecuit - Annual review of cell and …, 2022 - annualreviews.org
Patterns are ubiquitous in living systems and underlie the dynamic organization of cells,
tissues, and embryos. Mathematical frameworks have been devised to account for the self …

[图书][B] Stochastic processes in cell biology

PC Bressloff - 2014 - Springer
One of the major challenges in modern biology is to understand how the molecular
components of a living cell operate in a highly noisy environment. What are the specific …

Pattern generation with nucleic acid chemical reaction networks

SS Wang, AD Ellington - Chemical Reviews, 2019 - ACS Publications
Biological and biochemical systems are manifestations of chemical reaction networks
(CRNs). The ability to design and engineer such networks may allow the construction of …

Hox Genes Regulate Digit Patterning by Controlling the Wavelength of a Turing-Type Mechanism

R Sheth, L Marcon, MF Bastida, M Junco, L Quintana… - Science, 2012 - science.org
The formation of repetitive structures (such as stripes) in nature is often consistent with a
reaction-diffusion mechanism, or Turing model, of self-organizing systems. We used mouse …

Efficient numerical techniques for computing the Riesz fractional-order reaction-diffusion models arising in biology

M Alqhtani, KM Owolabi, KM Saad, E Pindza - Chaos, Solitons & Fractals, 2022 - Elsevier
In this work, the solution of Riesz space fractional partial differential equations of parabolic
type is considered. Since fractional-in-space operators have been applied to model …

Complex Turing patterns in chaotic dynamics of autocatalytic reactions with the Caputo fractional derivative

KM Owolabi, RP Agarwal, E Pindza, S Bernstein… - Neural Computing and …, 2023 - Springer
Many chemical systems exhibit a range of patterns, a noticeable and interesting class of
numerical patterns that arise in autocatalytic reactions which changes with increasing spatial …

A local radial basis function method for advection–diffusion–reaction equations on complexly shaped domains

SA Sarra - Applied mathematics and Computation, 2012 - Elsevier
Time-dependent advection–diffusion–reaction and diffusion–reaction equations are used as
models in biology, chemistry, physics, and engineering. As representative examples, we …

Variational system identification of the partial differential equations governing the physics of pattern-formation: Inference under varying fidelity and noise

Z Wang, X Huan, K Garikipati - Computer Methods in Applied Mechanics …, 2019 - Elsevier
We present a contribution to the field of system identification of partial differential equations
(PDEs), with emphasis on discerning between competing mathematical models of pattern …

Bespoke turing systems

TE Woolley, AL Krause, EA Gaffney - Bulletin of Mathematical Biology, 2021 - Springer
Reaction–diffusion systems are an intensively studied form of partial differential equation,
frequently used to produce spatially heterogeneous patterned states from homogeneous …

Spatiotemporal dynamics of reaction–diffusion system and its application to turing pattern formation in a gray–scott model

I Ali, MT Saleem - Mathematics, 2023 - mdpi.com
This paper deals with the effects of partial differential equations on the development of
spatiotemporal patterns in reaction–diffusion systems. These systems describe how the …