Microbial Pathway Thermodynamics: Stoichiometric Models Unveil Anabolic and Catabolic Processes
O Ebenhöh, J Ebeling, R Meyer, F Pohlkotte, T Nies - Life, 2024 - mdpi.com
The biotechnological exploitation of microorganisms enables the use of metabolism for the
production of economically valuable substances, such as drugs or food. It is, thus …
production of economically valuable substances, such as drugs or food. It is, thus …
A hierarchy of metabolite exchanges in metabolic models of microbial species and communities
The metabolic network of an organism can be analyzed as a constraint-based model. This
analysis can be biased, optimizing an objective such as growth rate, or unbiased, aiming to …
analysis can be biased, optimizing an objective such as growth rate, or unbiased, aiming to …
Scalable enumeration and sampling of minimal metabolic pathways for organisms and communities
Many interactions in microbial consortia or tissues of multicellular organisms rely on
networks of metabolite exchanges. To predict community function and composition beyond …
networks of metabolite exchanges. To predict community function and composition beyond …
Microbial pathway thermodynamics: structural models unveil anabolic and catabolic processes
O Ebenhoeh, J Ebeling, R Meyer, F Pohlkotte, T Nies - bioRxiv, 2023 - biorxiv.org
The biotechnological exploitation of microorganisms enables the use of metabolism for the
production of economically valuable substances, such as drugs or food. It is, thus …
production of economically valuable substances, such as drugs or food. It is, thus …