Single-molecule force spectroscopy of membrane protein folding

WCB Wijesinghe, D Min - Journal of Molecular Biology, 2023 - Elsevier
Single-molecule force spectroscopy is a unique method that can probe the structural
changes of single proteins at a high spatiotemporal resolution while mechanically …

Insights into the role of membrane lipids in the structure, function and regulation of integral membrane proteins

K Renard, B Byrne - International journal of molecular sciences, 2021 - mdpi.com
Membrane proteins exist within the highly hydrophobic membranes surrounding cells and
organelles, playing key roles in cellular function. It is becoming increasingly clear that the …

Enhanced Thermostability of Candida Ketoreductase by Computation-Based Cross-Regional Combinatorial Mutagenesis

C Chen, BH Guan, Q Geng, YC Zheng, Q Chen… - ACS …, 2023 - ACS Publications
The flexible regions represented by loops have been the focus of protein stability
engineering. However, residues located in specific rigid regions are also crucial for protein …

Cryo-EM and artificial intelligence visualize endogenous protein community members

I Skalidis, FL Kyrilis, C Tüting, F Hamdi, G Chojnowski… - Structure, 2022 - cell.com
Cellular function is underlined by megadalton assemblies organizing in proximity, forming
communities. Metabolons are protein communities involving metabolic pathways such as …

Stretch-activated ion channel TMEM63B associates with developmental and epileptic encephalopathies and progressive neurodegeneration

A Vetro, C Pelorosso, S Balestrini, A Masi… - The American Journal of …, 2023 - cell.com
By converting physical forces into electrical signals or triggering intracellular cascades,
stretch-activated ion channels allow the cell to respond to osmotic and mechanical stress …

Inside Out Computational Redesign of Cavities for Improving Thermostability and Catalytic Activity of Rhizomucor Miehei Lipase

Z Zhang, M Long, N Zheng, X Lü, C Zhu… - Applied and …, 2023 - Am Soc Microbiol
Cavities are created by hydrophobic interactions between residue side chain atoms during
the folding of enzymes. Redesigning cavities can improve the thermostability and catalytic …

How physical forces drive the process of helical membrane protein folding

K Corin, JU Bowie - EMBO reports, 2022 - embopress.org
Protein folding is a fundamental process of life with important implications throughout
biology. Indeed, tens of thousands of mutations have been associated with diseases, and …

Principles and methods in computational membrane protein design

AA Vorobieva - Journal of Molecular Biology, 2021 - Elsevier
After decades of progress in computational protein design, the design of proteins folding and
functioning in lipid membranes appears today as the next frontier. Some notable successes …

Diverse models of cavity engineering in enzyme modification: Creation, filling, and reshaping

Z Zhang, Y Cai, N Zheng, Y Deng, L Gao, Q Wang… - Biotechnology …, 2024 - Elsevier
Most enzyme modification strategies focus on designing the active sites or their surrounding
structures. Interestingly, a large portion of the enzymes (60%) feature active sites located …

Redesign of γ-glutamyl transpeptidase from Bacillus subtilis for high-level production of L-theanine by cavity topology engineering

Z Zhang, M Long, N Zheng, Y Deng, Q Wang… - Applied Microbiology …, 2023 - Springer
L-Theanine is a multifunctional nonprotein amino acid found naturally in tea leaves. It has
been developed as a commercial product for a wide range of applications in the food …