[HTML][HTML] Is non-homologous end-joining really an inherently error-prone process?
M Bétermier, P Bertrand, BS Lopez - PLoS genetics, 2014 - journals.plos.org
DNA double-strand breaks (DSBs) are harmful lesions leading to genomic instability or
diversity. Non-homologous end-joining (NHEJ) is a prominent DSB repair pathway, which …
diversity. Non-homologous end-joining (NHEJ) is a prominent DSB repair pathway, which …
[PDF][PDF] Mobile genetic elements and evolution of CRISPR-Cas systems: all the way there and back
EV Koonin, KS Makarova - Genome biology and evolution, 2017 - academic.oup.com
Abstract The Clustered Regularly Interspaced Palindromic Repeats (CRISPR)-CRISPR-
associated proteins (Cas) systems of bacterial and archaeal adaptive immunity show …
associated proteins (Cas) systems of bacterial and archaeal adaptive immunity show …
From “cellular” RNA to “smart” RNA: multiple roles of RNA in genome stability and beyond
Coding for proteins has been considered the main function of RNA since the “central
dogma” of biology was proposed. The discovery of noncoding transcripts shed light on …
dogma” of biology was proposed. The discovery of noncoding transcripts shed light on …
Genome-defence small RNAs exapted for epigenetic mating-type inheritance
DP Singh, B Saudemont, G Guglielmi, O Arnaiz… - Nature, 2014 - nature.com
In the ciliate Paramecium, transposable elements and their single-copy remnants are
deleted during the development of somatic macronuclei from germline micronuclei, at each …
deleted during the development of somatic macronuclei from germline micronuclei, at each …
Programmed Rearrangement in Ciliates: Paramecium
M Betermier, S Duharcourt - Mobile DNA III, 2015 - Wiley Online Library
Ciliates belong to a monophyletic group of unicellular eukaryotes within the Alveolate
branch (1). The species that have been used as model organisms are free‐living organisms …
branch (1). The species that have been used as model organisms are free‐living organisms …
The piggyBac transposon-derived genes TPB1 and TPB6 mediate essential transposon-like excision during the developmental rearrangement of key genes in …
Ciliated protozoans perform extreme forms of programmed somatic DNA rearrangement
during development. The model ciliate Tetrahymena thermophila removes 34% of its …
during development. The model ciliate Tetrahymena thermophila removes 34% of its …
Chromatin remodeling is required for sRNA‐guided DNA elimination in Paramecium
A Singh, XX Maurer‐Alcalá, T Solberg… - The EMBO …, 2022 - embopress.org
Small RNAs mediate the silencing of transposable elements and other genomic loci,
increasing nucleosome density and preventing undesirable gene expression. The …
increasing nucleosome density and preventing undesirable gene expression. The …
[HTML][HTML] CRISPR: a new principle of genome engineering linked to conceptual shifts in evolutionary biology
EV Koonin - Biology & Philosophy, 2019 - Springer
The CRISPR-Cas systems of bacterial and archaeal adaptive immunity have become a
household name among biologists and even the general public thanks to the …
household name among biologists and even the general public thanks to the …
[HTML][HTML] Ku-Mediated Coupling of DNA Cleavage and Repair during Programmed Genome Rearrangements in the Ciliate Paramecium tetraurelia
A Marmignon, J Bischerour, A Silve, C Fojcik… - PLoS …, 2014 - journals.plos.org
During somatic differentiation, physiological DNA double-strand breaks (DSB) can drive
programmed genome rearrangements (PGR), during which DSB repair pathways are …
programmed genome rearrangements (PGR), during which DSB repair pathways are …
[HTML][HTML] Functional diversification of Paramecium Ku80 paralogs safeguards genome integrity during precise programmed DNA elimination
A Abello, V Régnier, O Arnaiz, R Le Bars… - PLoS …, 2020 - journals.plos.org
Gene duplication and diversification drive the emergence of novel functions during
evolution. Because of whole genome duplications, ciliates from the Paramecium aurelia …
evolution. Because of whole genome duplications, ciliates from the Paramecium aurelia …