Making sense of it all: bacterial chemotaxis

GH Wadhams, JP Armitage - Nature reviews Molecular cell biology, 2004 - nature.com
Bacteria must be able to respond to a changing environment, and one way to respond is to
move. The transduction of sensory signals alters the concentration of small phosphorylated …

Allostery and cooperativity revisited

Q Cui, M Karplus - Protein science, 2008 - Wiley Online Library
Although phenomenlogical models that account for cooperativity in allosteric systems date
back to the early and mid‐60's (eg, the KNF and MWC models), there is resurgent interest in …

[HTML][HTML] Mapping allosteric communications within individual proteins

J Wang, A Jain, LR McDonald, C Gambogi… - Nature …, 2020 - nature.com
Allostery in proteins influences various biological processes such as regulation of gene
transcription and activities of enzymes and cell signaling. Computational approaches for …

[HTML][HTML] Structural insight into partner specificity and phosphoryl transfer in two-component signal transduction

P Casino, V Rubio, A Marina - Cell, 2009 - cell.com
The chief mechanism used by bacteria for sensing their environment is based on two
conserved proteins: a sensor histidine kinase (HK) and an effector response regulator (RR) …

Structural classification of bacterial response regulators: diversity of output domains and domain combinations

MY Galperin - Journal of bacteriology, 2006 - Am Soc Microbiol
CheY-like phosphoacceptor (or receiver [REC]) domain is a common module in a variety of
response regulators of the bacterial signal transduction systems. In this work, 4,610 …

Structural basis of activity and allosteric control of diguanylate cyclase

C Chan, R Paul, D Samoray… - Proceedings of the …, 2004 - National Acad Sciences
Recent discoveries suggest that a novel second messenger, bis-(3′→ 5′)-cyclic di-GMP
(c-diGMP), is extensively used by bacteria to control multicellular behavior. Condensation of …

[HTML][HTML] Histidine protein kinases: key signal transducers outside the animal kingdom

PM Wolanin, PA Thomason, JB Stock - Genome biology, 2002 - Springer
Histidine protein kinases (HPKs) are a large family of signal-transduction enzymes that
autophosphorylate on a conserved histidine residue. HPKs form two-component signaling …

Bacterial flagellar motor

Y Sowa, RM Berry - Quarterly reviews of biophysics, 2008 - cambridge.org
The bacterial flagellar motor is a reversible rotary nano-machine, about 45 nm in diameter,
embedded in the bacterial cell envelope. It is powered by the flux of H+ or Na+ ions across …

Receiver domain structure and function in response regulator proteins

RB Bourret - Current opinion in microbiology, 2010 - Elsevier
During signal transduction by two-component regulatory systems, sensor kinases detect and
encode input information while response regulators (RRs) control output. Most receiver …

[HTML][HTML] Structure of BeF3−-modified response regulator PleD: implications for diguanylate cyclase activation, catalysis, and feedback inhibition

P Wassmann, C Chan, R Paul, A Beck, H Heerklotz… - Structure, 2007 - cell.com
Cyclic di-guanosine monophosphate (c-di-GMP) is a ubiquitous bacterial second
messenger involved in the regulation of cell surface-associated traits and persistence. We …