Next-generation sequencing technology: current trends and advancements

H Satam, K Joshi, U Mangrolia, S Waghoo, G Zaidi… - Biology, 2023 - mdpi.com
Simple Summary Next-generation sequencing (NGS) is a powerful tool used in genomics
research. NGS can sequence millions of DNA fragments at once, providing detailed …

The impact of the Fungus-Host-Microbiota interplay upon Candida albicans infections: current knowledge and new perspectives

C d'Enfert, AK Kaune, LR Alaban… - FEMS microbiology …, 2021 - academic.oup.com
Candida albicans is a major fungal pathogen of humans. It exists as a commensal in the oral
cavity, gut or genital tract of most individuals, constrained by the local microbiota, epithelial …

Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?

R Lücking, MC Aime, B Robbertse, AN Miller… - IMA fungus, 2020 - Springer
True fungi (Fungi) and fungus-like organisms (eg Mycetozoa, Oomycota) constitute the
second largest group of organisms based on global richness estimates, with around 3 …

Diagnosis of invasive fungal infections: challenges and recent developments

W Fang, J Wu, M Cheng, X Zhu, M Du, C Chen… - Journal of biomedical …, 2023 - Springer
Background The global burden of invasive fungal infections (IFIs) has shown an upsurge in
recent years due to the higher load of immunocompromised patients suffering from various …

Network analysis and subsequent culturing reveal keystone taxa involved in microbial litter decomposition dynamics

H Zheng, T Yang, Y Bao, P He, K Yang, X Mei… - Soil Biology and …, 2021 - Elsevier
Plant litter decomposition in the soil is governed by microorganisms such as bacteria and
fungi that colonize lignocellulose residues during the decomposition process, and thus, the …

Fungal identification using molecular tools: a primer for the natural products research community

HA Raja, AN Miller, CJ Pearce… - Journal of natural …, 2017 - ACS Publications
Fungi are morphologically, ecologically, metabolically, and phylogenetically diverse. They
are known to produce numerous bioactive molecules, which makes them very useful for …

The gut mycobiota: insights into analysis, environmental interactions and role in gastrointestinal diseases

ML Richard, H Sokol - Nature Reviews Gastroenterology & Hepatology, 2019 - nature.com
The gut microbiota is a dense and diverse ecosystem that is involved in many physiological
functions as well as in disease pathogenesis. It is dominated by bacteria, which have been …

Trichoderma: Advent of Versatile Biocontrol Agent, Its Secrets and Insights into Mechanism of Biocontrol Potential

N Manzar, AS Kashyap, RS Goutam, MVS Rajawat… - Sustainability, 2022 - mdpi.com
Trichoderma is an important biocontrol agent for managing plant diseases. Trichoderma
species are members of the fungal genus hyphomycetes, which is widely distributed in soil …

Next‐generation monitoring of aquatic biodiversity using environmental DNA metabarcoding

A Valentini, P Taberlet, C Miaud, R Civade… - Molecular …, 2016 - Wiley Online Library
Global biodiversity in freshwater and the oceans is declining at high rates. Reliable tools for
assessing and monitoring aquatic biodiversity, especially for rare and secretive species, are …

Genome-resolved metagenomics reveals distinct phosphorus acquisition strategies between soil microbiomes

X Wu, C Rensing, D Han, KQ Xiao, Y Dai, Z Tang… - Msystems, 2022 - Am Soc Microbiol
Enhancing soil phosphate solubilization is a promising strategy for agricultural sustainability,
while little is known about the mechanisms of how microorganisms cope with differing …