Chromosome organization in bacteria: mechanistic insights into genome structure and function

RT Dame, FZM Rashid, DC Grainger - Nature Reviews Genetics, 2020 - nature.com
Bacterial chromosomes are folded to compact DNA and facilitate cellular processes.
Studying model bacteria has revealed aspects of chromosome folding that are applicable to …

Recent advances in optical tweezers

JR Moffitt, YR Chemla, SB Smith… - Annu. Rev …, 2008 - annualreviews.org
It has been over 20 years since the pioneering work of Arthur Ashkin, and in the intervening
years, the field of optical tweezers has grown tremendously. Optical tweezers are now being …

Diversity, versatility and complexity of bacterial gene regulation mechanisms: opportunities and drawbacks for applications in synthetic biology

I Bervoets, D Charlier - FEMS microbiology reviews, 2019 - academic.oup.com
Gene expression occurs in two essential steps: transcription and translation. In bacteria, the
two processes are tightly coupled in time and space, and highly regulated. Tight regulation …

Selective Silencing of Foreign DNA with Low GC Content by the H-NS Protein in Salmonella

WW Navarre, S Porwollik, Y Wang, M McClelland… - Science, 2006 - science.org
Horizontal gene transfer plays a major role in microbial evolution. However, newly acquired
sequences can decrease fitness unless integrated into preexisting regulatory networks. We …

Architecture of the Escherichia coli nucleoid

SC Verma, Z Qian, SL Adhya - PLoS genetics, 2019 - journals.plos.org
How genomes are organized within cells and how the 3D architecture of a genome
influences cellular functions are significant questions in biology. A bacterial genomic DNA …

H-NS: a universal regulator for a dynamic genome

CJ Dorman - Nature Reviews Microbiology, 2004 - nature.com
The effect of the bacterial heat-stable nucleoid-structuring (H-NS) protein on gene
expression is overwhelmingly negative and extends throughout the genome, pointing to an …

Subcellular organization: a critical feature of bacterial cell replication

IV Surovtsev, C Jacobs-Wagner - Cell, 2018 - cell.com
Spatial organization is a hallmark of all living systems. Even bacteria, the smallest forms of
cellular life, display defined shapes and complex internal organization, showcasing a highly …

The role of nucleoid‐associated proteins in the organization and compaction of bacterial chromatin

RT Dame - Molecular microbiology, 2005 - Wiley Online Library
The bacterial chromosomal DNA is folded into a compact structure called nucleoid. The
shape and size of this 'body'is determined by a number of factors. Major players are DNA …

Bacterial chromatin organization by H-NS protein unravelled using dual DNA manipulation

RT Dame, MC Noom, GJL Wuite - Nature, 2006 - nature.com
Both prokaryotic and eukaryotic organisms contain DNA bridging proteins, which can have
regulatory or architectural functions. The molecular and mechanical details of such proteins …

Optical tweezers analysis of DNA–protein complexes

I Heller, TP Hoekstra, GA King, EJG Peterman… - Chemical …, 2014 - ACS Publications
Cellular DNA is continuously engaged in a molecular dance with many accessory proteins.
These proteins are responsible for orchestrating the storage, maintenance, and transfer of …