Investigating prenatal and perinatal factors on meconium microbiota: a systematic review and cohort study

J Turunen, MV Tejesvi, N Paalanne, T Pokka… - Pediatric …, 2024 - nature.com
Background The first-pass meconium has been suggested as a proxy for the fetal gut
microbiota because it is formed in utero. This systematic review and cohort study …

Prime-seq, efficient and powerful bulk RNA sequencing

A Janjic, LE Wange, JW Bagnoli, J Geuder, P Nguyen… - Genome biology, 2022 - Springer
Cost-efficient library generation by early barcoding has been central in propelling single-cell
RNA sequencing. Here, we optimize and validate prime-seq, an early barcoding bulk RNA …

Competitive interference among rhizobia reduces benefits to hosts

A Rahman, M Manci, C Nadon, IA Perez, WF Farsamin… - Current Biology, 2023 - cell.com
The capacity of beneficial microbes to compete for host infection—and the ability of hosts to
discriminate among them—introduces evolutionary conflict that is predicted to destabilize …

Host genotype and colonist arrival order jointly govern plant microbiome composition and function

DR Leopold, PE Busby - Current Biology, 2020 - cell.com
The composition of host-associated microbiomes can have important consequences for host
health and fitness [1–3]. Yet we still lack understanding of many fundamental processes that …

Fecal microbiome alterations in treatment-naive de novo Parkinson's disease

JM Boertien, K Murtomäki, PAB Pereira… - npj Parkinson's …, 2022 - nature.com
Gut microbiota alterations in Parkinson's disease (PD) have been found in several studies
and are suggested to contribute to the pathogenesis of PD. However, previous results could …

Retracted: gut microbiome signatures of risk and prodromal markers of Parkinson disease

S Heinzel, VTE Aho, U Suenkel… - Annals of …, 2020 - Wiley Online Library
Retraction: Heinzel, S. et al., Gut Microbiome Signatures of Risk and Prodromal Markers of
Parkinson Disease, Annals of Neurology 2020, 88 (2), 320‐331 (https://onlinelibrary. wiley …

Gut microbiome signatures of risk and prodromal markers of Parkinson disease

S Heinzel, VTE Aho, U Suenkel… - Annals of …, 2021 - Wiley Online Library
Objective Alterations of the gut microbiome in Parkinson disease (PD) have been repeatedly
demonstrated. However, little is known about whether such alterations precede disease …

Subgingival microbiota in a population with and without cognitive dysfunction

J Holmer, V Aho, M Eriksdotter, L Paulin… - Journal of oral …, 2021 - Taylor & Francis
Aim: The aim of this study was to compare the subgingival microbiota of people with
Alzheimer´ s disease (AD), mild cognitive impairment (MCI), subjective cognitive decline …

Dissecting intercellular and intracellular signaling networks with barcoded genetic tools

A Herholt, VK Sahoo, L Popovic, MC Wehr… - Current Opinion in …, 2022 - Elsevier
The power of next-generation sequencing has stimulated the development of many analysis
techniques for transcriptomics and genomics. More recently, the concept of 'molecular …

Spatial transcriptomics using multiplexed deterministic barcoding in tissue

J Wirth, N Huber, K Yin, S Brood, S Chang… - Nature …, 2023 - nature.com
Spatially resolved transcriptomics of tissue sections enables advances in fundamental and
applied biomedical research. Here, we present Multiplexed Deterministic Barcoding in …