Genome-wide functional screens enable the prediction of high activity CRISPR-Cas9 and -Cas12a guides in Yarrowia lipolytica
Genome-wide functional genetic screens have been successful in discovering genotype-
phenotype relationships and in engineering new phenotypes. While broadly applied in …
phenotype relationships and in engineering new phenotypes. While broadly applied in …
Superior target genes and pathways for RNAi‐mediated pest control revealed by genome‐wide analysis in the beetle Tribolium castaneum
B Buer, J Dönitz, M Milner, S Mehlhorn… - Pest Management …, 2024 - Wiley Online Library
BACKGROUND An increasing human population, the emergence of resistances against
pesticides and their potential impact on the environment call for the development of new eco …
pesticides and their potential impact on the environment call for the development of new eco …
iEssLnc: quantitative estimation of lncRNA gene essentialities with meta-path-guided random walks on the lncRNA-protein interaction network
YY Zhang, DM Liang, PF Du - Briefings in Bioinformatics, 2023 - academic.oup.com
Gene essentiality is defined as the extent to which a gene is required for the survival and
reproductive success of a living system. It can vary between genetic backgrounds and …
reproductive success of a living system. It can vary between genetic backgrounds and …
Untangling the Context-Specificity of Essential Genes by Means of Machine Learning: A Constructive Experience
Gene essentiality is a genetic concept crucial for a comprehensive understanding of life and
evolution. In the last decade, many essential genes (EGs) have been determined using …
evolution. In the last decade, many essential genes (EGs) have been determined using …
'Bingo'—a large language model-and graph neural network-based workflow for the prediction of essential genes from protein data
The identification and characterization of essential genes are central to our understanding of
the core biological functions in eukaryotic organisms, and has important implications for the …
the core biological functions in eukaryotic organisms, and has important implications for the …
Inference of Essential Genes of the Parasite Haemonchus contortus via Machine Learning
Over the years, comprehensive explorations of the model organisms Caenorhabditis
elegans (elegant worm) and Drosophila melanogaster (vinegar fly) have contributed …
elegans (elegant worm) and Drosophila melanogaster (vinegar fly) have contributed …
HELP: A computational framework for labelling and predicting human common and context-specific essential genes
Machine learning-based approaches are particularly suitable for identifying essential genes
as they allow the generation of predictive models trained on features from multi-source data …
as they allow the generation of predictive models trained on features from multi-source data …
Combination of computational techniques and RNAi reveal targets in Anopheles gambiae for malaria vector control
Increasing reports of insecticide resistance continue to hamper the gains of vector control
strategies in curbing malaria transmission. This makes identifying new insecticide targets or …
strategies in curbing malaria transmission. This makes identifying new insecticide targets or …
[HTML][HTML] Inference of essential genes in Brugia malayi and Onchocerca volvulus by machine learning and the implications for discovering new interventions
Detailed explorations of the model organisms Caenorhabditis elegans (elegant worm) and
Drosophila melanogaster (vinegar fly) have substantially improved our knowledge and …
Drosophila melanogaster (vinegar fly) have substantially improved our knowledge and …
Machine learning on large scale perturbation screens for SARS-CoV-2 host factors identifies β-catenin/CBP inhibitor PRI-724 as a potent antiviral
MA Kelch, A Vera-Guapi, T Beder, M Oswald… - Frontiers in …, 2023 - frontiersin.org
Expanding antiviral treatment options against SARS-CoV-2 remains crucial as the virus
evolves under selection pressure which already led to the emergence of several drug …
evolves under selection pressure which already led to the emergence of several drug …