Conventional and non-conventional Drosophila Toll signaling

SA Lindsay, SA Wasserman - Developmental & Comparative Immunology, 2014 - Elsevier
The discovery of Toll in Drosophila and of the remarkable conservation in pathway
composition and organization catalyzed a transformation in our understanding of innate …

Modelling the Bicoid gradient

O Grimm, M Coppey, E Wieschaus - Development, 2010 - journals.biologists.com
Morphogen gradients provide embryonic tissues with positional information by inducing
target genes at different concentration thresholds and thus at different positions. The Bicoid …

Temporal Coordination of Gene Networks by Zelda in the Early Drosophila Embryo

CY Nien, HL Liang, S Butcher, Y Sun, S Fu… - PLoS …, 2011 - journals.plos.org
In past years, much attention has focused on the gene networks that regulate early
developmental processes, but less attention has been paid to how multiple networks and …

Zelda overcomes the high intrinsic nucleosome barrier at enhancers during Drosophila zygotic genome activation

Y Sun, CY Nien, K Chen, HY Liu, J Johnston… - Genome …, 2015 - genome.cshlp.org
The Drosophila genome activator Vielfaltig (Vfl), also known as Zelda (Zld), is thought to
prime enhancers for activation by patterning transcription factors (TFs). Such priming is …

Paused Pol II coordinates tissue morphogenesis in the Drosophila embryo

M Lagha, JP Bothma, E Esposito, S Ng, L Stefanik… - Cell, 2013 - cell.com
Summary Paused RNA polymerase (Pol II) is a pervasive feature of Drosophila embryos and
mammalian stem cells, but its role in development is uncertain. Here, we demonstrate that a …

Zelda potentiates morphogen activity by increasing chromatin accessibility

SM Foo, Y Sun, B Lim, R Ziukaite, K O'Brien, CY Nien… - Current Biology, 2014 - cell.com
Zygotic genome activation (ZGA) is a major genome programming event whereby the cells
of the embryo begin to adopt specified fates. Experiments in Drosophila and zebrafish have …

A microfluidic array for large-scale ordering and orientation of embryos

K Chung, Y Kim, JS Kanodia, E Gong, SY Shvartsman… - Nature …, 2011 - nature.com
Quantitative studies of embryogenesis require the ability to monitor pattern formation and
morphogenesis in large numbers of embryos, at multiple time points and in diverse genetic …

The Drosophila pioneer factor Zelda modulates the nuclear microenvironment of a dorsal target enhancer to potentiate transcriptional output

S Yamada, PH Whitney, SK Huang, EC Eck, HG Garcia… - Current Biology, 2019 - cell.com
Connecting the developmental patterning of tissues to the mechanistic control of RNA
polymerase II remains a long-term goal of developmental biology. Many key elements have …

Actomyosin-based tissue folding requires a multicellular myosin gradient

NC Heer, PW Miller, S Chanet, N Stoop… - …, 2017 - journals.biologists.com
Tissue folding promotes three-dimensional (3D) form during development. In many cases,
folding is associated with myosin accumulation at the apical surface of epithelial cells, as …

Dorsal-ventral gene expression in the Drosophila embryo reflects the dynamics and precision of the dorsal nuclear gradient

GT Reeves, N Trisnadi, TV Truong, M Nahmad, S Katz… - Developmental cell, 2012 - cell.com
Patterning of the dorsal-ventral axis in the early Drosophila embryo depends on the nuclear
distribution of the Dorsal transcription factor. Using live two-photon light-sheet microscopy …