[HTML][HTML] MFSynDCP: multi-source feature collaborative interactive learning for drug combination synergy prediction

Y Dong, Y Chang, Y Wang, Q Han, X Wen, Z Yang… - BMC …, 2024 - Springer
Drug combination therapy is generally more effective than monotherapy in the field of cancer
treatment. However, screening for effective synergistic combinations from a wide range of …

[HTML][HTML] De novo drug design through artificial intelligence: an introduction

D Crucitti, C Pérez Míguez, JÁ Díaz Arias… - Frontiers in …, 2024 - frontiersin.org
Developing new drugs is a complex and formidable challenge, intensified by rapidly
evolving global health needs. De novo drug design is a promising strategy to accelerate and …

Streamlining Computational Fragment-Based Drug Discovery through Evolutionary Optimization Informed by Ligand-Based Virtual Prescreening

R Chandraghatgi, HF Ji, GL Rosen… - Journal of chemical …, 2024 - ACS Publications
Recent advances in computational methods provide the promise of dramatically
accelerating drug discovery. While mathematical modeling and machine learning have …

DrugSynthMC: An Atom-Based Generation of Drug-like Molecules with Monte Carlo Search

M Roucairol, A Georgiou, T Cazenave… - Journal of Chemical …, 2024 - ACS Publications
A growing number of deep learning (DL) methodologies have recently been developed to
design novel compounds and expand the chemical space within virtual libraries. Most of …

[HTML][HTML] SPOTLIGHT: structure-based prediction and optimization tool for ligand generation on hard-to-drug targets–combining deep reinforcement learning with …

VSS Adury, A Mukherjee - Digital Discovery, 2024 - pubs.rsc.org
We present SPOTLIGHT, a proof-of-concept for a method capable of designing a diverse set
of novel drug molecules through a rules-based approach. The model constructs molecules …

Generate What You Can Make: Achieving in-house synthesizability with readily available resources in de novo drug design

AK Hassen, M Sicho, YJ van Aalst, MCW Huizenga… - 2024 - chemrxiv.org
Molecules generated by Computer-Aided Drug Design often lack synthesizability to be
valuable because Computer-Aided Synthesis Planning (CASP) and CASP-based …

An AI-Driven Framework for Discovery of BACE1 Inhibitors for Alzheimer's Disease

E Xie, K Hasegawa, G Kementzidis, E Papadopoulos… - bioRxiv, 2024 - biorxiv.org
Alzheimer's Disease (AD) is a progressive neurodegenerative disorder that affects over 51
million individuals globally. The β-secretase (BACE1) enzyme is responsible for the …

Emerging trends in computational approaches for drug discovery in molecular biology

YM Yuguda, IE Unuebho… - GSC Biological and …, 2023 - gsconlinepress.com
Purpose of Research: This review paper delves into the transformative impact of
computational approaches on drug discovery within molecular biology. It explores how …

QSPRpred: a Flexible Open-Source Quantitative Structure-Property Relationship Modelling Tool

HW van den Maagdenberg, M Šícho, DA Araripe… - 2024 - chemrxiv.org
Building reliable and robust quantitative structure-property relationship (QSPR) models is a
challenging task. First, the experimental data needs to be obtained, analyzed and curated …

[PDF][PDF] DMCCB Basel Symposium 2024: Therapeutics by Computational Design: Innovations in Drug Discovery and AI: Medicinal Chemistry and Chemical Biology …

SR Williams - CHIMIA, 2024 - chimia.ch
Syngenta Crop Protection AG, Schaffhauserstr. 101, CH-4332 Stein 2023 was the year of
ChatGPT and artificial intelligence is becoming increasingly ubiquitous in all walks of life. In …