[HTML][HTML] Past, present, and future perspectives of environmental DNA (eDNA) metabarcoding: A systematic review in methods, monitoring, and applications of global …
KM Ruppert, RJ Kline, MS Rahman - Global Ecology and Conservation, 2019 - Elsevier
Environmental DNA (eDNA) metabarcoding is a novel method of assessing biodiversity
wherein samples are taken from the environment via water, sediment or air from which DNA …
wherein samples are taken from the environment via water, sediment or air from which DNA …
[HTML][HTML] DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work
Effective identification of species using short DNA fragments (DNA barcoding and DNA
metabarcoding) requires reliable sequence reference libraries of known taxa. Both …
metabarcoding) requires reliable sequence reference libraries of known taxa. Both …
Meta‐analysis shows both congruence and complementarity of DNA and eDNA metabarcoding to traditional methods for biological community assessment
F Keck, RC Blackman, R Bossart… - Molecular …, 2022 - Wiley Online Library
DNA metabarcoding is increasingly used for the assessment of aquatic communities, and
numerous studies have investigated the consistency of this technique with traditional …
numerous studies have investigated the consistency of this technique with traditional …
[HTML][HTML] The future of biotic indices in the ecogenomic era: Integrating (e) DNA metabarcoding in biological assessment of aquatic ecosystems
The bioassessment of aquatic ecosystems is currently based on various biotic indices that
use the occurrence and/or abundance of selected taxonomic groups to define ecological …
use the occurrence and/or abundance of selected taxonomic groups to define ecological …
[图书][B] A practical guide to DNA-based methods for biodiversity assessment.
This book represents a synthesis of knowledge and best practice in the field of DNA-based
biomonitoring at the time of writing. It has been written with end-users of molecular tools in …
biomonitoring at the time of writing. It has been written with end-users of molecular tools in …
Navigating the seven challenges of taxonomic reference databases in metabarcoding analyses
Assessment of biodiversity using metabarcoding data, such as from bulk or environmental
DNA sampling, is becoming increasingly relevant in ecology, biodiversity sciences and …
DNA sampling, is becoming increasingly relevant in ecology, biodiversity sciences and …
Ecosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap
T Cordier, L Alonso‐Sáez… - Molecular …, 2021 - Wiley Online Library
A decade after environmental scientists integrated high‐throughput sequencing
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …
The expanding role of DNA barcodes: Indispensable tools for ecology, evolution, and conservation
DNA barcoding has transformed the fields of ecology, evolution, and conservation by
providing a rapid and effective tool for species identification. The growth of DNA barcodes as …
providing a rapid and effective tool for species identification. The growth of DNA barcodes as …
Diat. barcode, an open-access curated barcode library for diatoms
F Rimet, E Gusev, M Kahlert, MG Kelly… - Scientific Reports, 2019 - nature.com
Diatoms (Bacillariophyta) are ubiquitous microalgae which produce a siliceous exoskeleton
and which make a major contribution to the productivity of oceans and freshwaters. They …
and which make a major contribution to the productivity of oceans and freshwaters. They …
Diatom DNA metabarcoding for biomonitoring: strategies to avoid major taxonomical and bioinformatical biases limiting molecular indices capacities
Recent years provided intense progression in the implementation of molecular techniques in
a wide variety of research fields in ecology. Biomonitoring and bioassessment can greatly …
a wide variety of research fields in ecology. Biomonitoring and bioassessment can greatly …