The mammalian gene function resource: the International Knockout Mouse Consortium

A Bradley, K Anastassiadis, A Ayadi, JF Battey… - Mammalian …, 2012 - Springer
Abstract In 2007, the International Knockout Mouse Consortium (IKMC) made the ambitious
promise to generate mutations in virtually every protein-coding gene of the mouse genome …

The mammalian phenotype ontology: enabling robust annotation and comparative analysis

CL Smith, JT Eppig - Wiley Interdisciplinary Reviews: Systems …, 2009 - Wiley Online Library
The mouse has long been an important model for the study of human genetic disease.
Through the application of genetic engineering and mutagenesis techniques, the number of …

A conditional knockout resource for the genome-wide study of mouse gene function

WC Skarnes, B Rosen, AP West, M Koutsourakis… - Nature, 2011 - nature.com
Gene targeting in embryonic stem cells has become the principal technology for
manipulation of the mouse genome, offering unrivalled accuracy in allele design and access …

A text-mining analysis of the human phenome

MA Van Driel, J Bruggeman, G Vriend… - European journal of …, 2006 - nature.com
A number of large-scale efforts are underway to define the relationships between genes and
proteins in various species. But, few attempts have been made to systematically classify all …

The mouse ascending: perspectives for human-disease models

N Rosenthal, S Brown - Nature cell biology, 2007 - nature.com
The laboratory mouse is widely considered the model organism of choice for studying the
diseases of humans, with whom they share 99% of their genes. A distinguished history of …

Automated home-cage behavioural phenotyping of mice

H Jhuang, E Garrote, X Yu, V Khilnani, T Poggio… - Nature …, 2010 - nature.com
Neurobehavioural analysis of mouse phenotypes requires the monitoring of mouse
behaviour over long periods of time. In this study, we describe a trainable computer vision …

The Mammalian Phenotype Ontology as a tool for annotating, analyzing and comparing phenotypic information

CL Smith, CAW Goldsmith, JT Eppig - Genome biology, 2005 - Springer
Abstract The Mammalian Phenotype (MP) Ontology enables robust annotation of
mammalian phenotypes in the context of mutations, quantitative trait loci and strains that are …

SRC and TKS5 mediated podosome formation in fibroblasts promotes extracellular matrix invasion and pulmonary fibrosis

I Barbayianni, P Kanellopoulou, D Fanidis… - Nature …, 2023 - nature.com
The activation and accumulation of lung fibroblasts resulting in aberrant deposition of
extracellular matrix components, is a pathogenic hallmark of Idiopathic Pulmonary Fibrosis …

Systems genetics of metabolism: the use of the BXD murine reference panel for multiscalar integration of traits

PA Andreux, EG Williams, H Koutnikova… - Cell, 2012 - cell.com
Metabolic homeostasis is achieved by complex molecular and cellular networks that differ
significantly among individuals and are difficult to model with genetically engineered lines of …

Mendelian disorders deserve more attention

SE Antonarakis, JS Beckmann - Nature Reviews Genetics, 2006 - nature.com
The study of inherited monogenic diseases has contributed greatly to our mechanistic
understanding of pathogenic mutations and gene regulation, and to the development of …