Cyanobacteria: a precious bio-resource in agriculture, ecosystem, and environmental sustainability

JS Singh, A Kumar, AN Rai, DP Singh - Frontiers in microbiology, 2016 - frontiersin.org
Keeping in view, the challenges concerning agro-ecosystem and environment, the recent
developments in biotechnology offers a more reliable approach to address the food security …

Rapid adaptive responses to climate change in corals

G Torda, JM Donelson, M Aranda, DJ Barshis… - Nature Climate …, 2017 - nature.com
Pivotal to projecting the fate of coral reefs is the capacity of reef-building corals to
acclimatize and adapt to climate change. Transgenerational plasticity may enable some …

Viral community-wide auxiliary metabolic genes differ by lifestyles, habitats, and hosts

XQ Luo, P Wang, JL Li, M Ahmad, L Duan, LZ Yin… - Microbiome, 2022 - Springer
Background Viral-encoded auxiliary metabolic genes (AMGs) are important toolkits for
modulating their hosts' metabolisms and the microbial-driven biogeochemical cycles …

Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses

S Roux, JR Brum, BE Dutilh, S Sunagawa… - Nature, 2016 - nature.com
Ocean microbes drive biogeochemical cycling on a global scale. However, this cycling is
constrained by viruses that affect community composition, metabolic activity, and …

Determinants of community structure in the global plankton interactome

G Lima-Mendez, K Faust, N Henry, J Decelle, S Colin… - Science, 2015 - science.org
Species interaction networks are shaped by abiotic and biotic factors. Here, as part of the
Tara Oceans project, we studied the photic zone interactome using environmental factors …

[HTML][HTML] Long-term and high-concentration heavy-metal contamination strongly influences the microbiome and functional genes in Yellow River sediments

Y Chen, Y Jiang, H Huang, L Mou, J Ru, J Zhao… - Science of the Total …, 2018 - Elsevier
The world is facing a hard battle against soil pollution such as heavy metals. Metagenome
sequencing, 16S rRNA sequencing, and quantitative polymerase chain reaction (qPCR) …

Antibiotics and the gut microbiota

SR Modi, JJ Collins, DA Relman - The Journal of clinical …, 2014 - Am Soc Clin Investig
Antibiotics have been a cornerstone of innovation in the fields of public health, agriculture,
and medicine. However, recent studies have shed new light on the collateral damage they …

Bacteriophages in natural and artificial environments

S Batinovic, F Wassef, SA Knowler, DTF Rice… - Pathogens, 2019 - mdpi.com
Bacteriophages (phages) are biological entities that have attracted a great deal of attention
in recent years. They have been reported as the most abundant biological entities on the …

VirSorter: mining viral signal from microbial genomic data

S Roux, F Enault, BL Hurwitz, MB Sullivan - PeerJ, 2015 - peerj.com
Viruses of microbes impact all ecosystems where microbes drive key energy and substrate
transformations including the oceans, humans and industrial fermenters. However, despite …

[HTML][HTML] Origins and evolution of viruses of eukaryotes: The ultimate modularity

EV Koonin, VV Dolja, M Krupovic - Virology, 2015 - Elsevier
Viruses and other selfish genetic elements are dominant entities in the biosphere, with
respect to both physical abundance and genetic diversity. Various selfish elements …