DNA barcoding and taxonomy: dark taxa and dark texts

RDM Page - … Transactions of the Royal Society B …, 2016 - royalsocietypublishing.org
Both classical taxonomy and DNA barcoding are engaged in the task of digitizing the living
world. Much of the taxonomic literature remains undigitized. The rise of open access …

The impact of land use on non-native species incidence and number in local assemblages worldwide

D Liu, P Semenchuk, F Essl, B Lenzner… - Nature …, 2023 - nature.com
While the regional distribution of non-native species is increasingly well documented for
some taxa, global analyses of non-native species in local assemblages are still missing …

[HTML][HTML] Automated assembly of a reference taxonomy for phylogenetic data synthesis

JA Rees, K Cranston - Biodiversity Data Journal, 2017 - ncbi.nlm.nih.gov
Taxonomy and nomenclature data are critical for any project that synthesizes biodiversity
data, as most biodiversity data sets use taxonomic names to identify taxa. Open Tree of Life …

Use of globally unique identifiers (GUID s) to link herbarium specimen records to physical specimens

G Nelson, P Sweeney, E Gilbert - Applications in Plant …, 2018 - Wiley Online Library
With the advent of the US National Science Foundation's Advancing Digitization of
Biodiversity Collections program and related worldwide digitization initiatives, the rate of …

The tempo and mode of the taxonomic correction process: How taxonomists have corrected and recorrected North American bird species over the last 127 years

G Vaidya, D Lepage, R Guralnick - PLoS One, 2018 - journals.plos.org
While studies of taxonomy usually focus on species description, there is also a taxonomic
correction process that retests and updates existing species circumscriptions on the basis of …

[HTML][HTML] Recommendations for connecting molecular sequence and biodiversity research infrastructures through ELIXIR

RM Waterhouse, AF Adam-Blondon, D Agosti… - …, 2021 - ncbi.nlm.nih.gov
Threats to global biodiversity are increasingly recognised by scientists and the public as a
critical challenge. Molecular sequencing technologies offer means to catalogue, explore …

[PDF][PDF] The open biodiversity knowledge management system in scholarly publishing

V Senderov, L Penev - Research Ideas and Outcomes, 2016 - riojournal.com
This project aims to develop and implement novel ways of publication, visualization, and
dissemination of biodiversity and biodiversity-related data and thus bring the Open …

[HTML][HTML] A preliminary checklist of the freshwater snails of Sabah (Malaysian Borneo) deposited in the BORNEENSIS collection, Universiti Malaysia Sabah

TH Ng, J Dulipat, JK Foon, M Lopes-Lima, A Zieritz… - ZooKeys, 2017 - ncbi.nlm.nih.gov
Sabah, a Malaysian state at the north-eastern tip of Borneo, is situated in one of the Earth's
biodiversity hotspots yet its freshwater gastropod diversity remains poorly known. An …

Measuring what we don't know: biodiversity catalogs reveal bias in taxonomic effort

JA Gorneau, S Kulkarni, F Cala-Riquelme… - …, 2023 - academic.oup.com
Biodiversity catalogs are an invaluable resource for biological research. Efforts to
scientifically document biodiversity have not been evenly applied, either because of …

Mining data from legacy taxonomic literature and application for sampling spiders of the Teutamus group (Araneae; Liocranidae) in Southeast Asia

FA Rivera-Quiroz, B Petcharad, JA Miller - Scientific Reports, 2020 - nature.com
Taxonomic literature contains information about virtually ever known species on Earth. In
many cases, all that is known about a taxon is contained in this kind of literature, particularly …