A compendium of mutational cancer driver genes
A fundamental goal in cancer research is to understand the mechanisms of cell
transformation. This is key to developing more efficient cancer detection methods and …
transformation. This is key to developing more efficient cancer detection methods and …
The pancreatic cancer genome revisited
A Hayashi, J Hong… - … reviews Gastroenterology & …, 2021 - nature.com
Pancreatic cancer is a genetic disease, and the recurrent genetic alterations characteristic of
pancreatic cancer indicate the cellular processes that are targeted for malignant …
pancreatic cancer indicate the cellular processes that are targeted for malignant …
[PDF][PDF] Genomic and molecular landscape of DNA damage repair deficiency across the cancer genome atlas
TA Knijnenburg, L Wang, MT Zimmermann… - Cell reports, 2018 - cell.com
DNA damage repair (DDR) pathways modulate cancer risk, progression, and therapeutic
response. We systematically analyzed somatic alterations to provide a comprehensive view …
response. We systematically analyzed somatic alterations to provide a comprehensive view …
Genomic landscape of lung adenocarcinoma in East Asians
J Chen, H Yang, ASM Teo, LB Amer, FG Sherbaf… - Nature …, 2020 - nature.com
Lung cancer is the world's leading cause of cancer death and shows strong ancestry
disparities. By sequencing and assembling a large genomic and transcriptomic dataset of …
disparities. By sequencing and assembling a large genomic and transcriptomic dataset of …
Integration of multiomics data with graph convolutional networks to identify new cancer genes and their associated molecular mechanisms
The increase in available high-throughput molecular data creates computational challenges
for the identification of cancer genes. Genetic as well as non-genetic causes contribute to …
for the identification of cancer genes. Genetic as well as non-genetic causes contribute to …
[PDF][PDF] Comprehensive characterization of cancer driver genes and mutations
Identifying molecular cancer drivers is critical for precision oncology. Multiple advanced
algorithms to identify drivers now exist, but systematic attempts to combine and optimize …
algorithms to identify drivers now exist, but systematic attempts to combine and optimize …
[PDF][PDF] Somatic mutational landscape of splicing factor genes and their functional consequences across 33 cancer types
M Seiler, S Peng, AA Agrawal, J Palacino, T Teng… - Cell reports, 2018 - cell.com
Hotspot mutations in splicing factor genes have been recently reported at high frequency in
hematological malignancies, suggesting the importance of RNA splicing in cancer. We …
hematological malignancies, suggesting the importance of RNA splicing in cancer. We …
[PDF][PDF] Perspective on oncogenic processes at the end of the beginning of cancer genomics
L Ding, MH Bailey, E Porta-Pardo, V Thorsson… - Cell, 2018 - cell.com
Summary The Cancer Genome Atlas (TCGA) has catalyzed systematic characterization of
diverse genomic alterations underlying human cancers. At this historic junction marking the …
diverse genomic alterations underlying human cancers. At this historic junction marking the …
Identification of cancer driver genes based on nucleotide context
Cancer genomes contain large numbers of somatic mutations but few of these mutations
drive tumor development. Current approaches either identify driver genes on the basis of …
drive tumor development. Current approaches either identify driver genes on the basis of …
[PDF][PDF] CRISPR-mediated base editing enables efficient disruption of eukaryotic genes through induction of STOP codons
Standard CRISPR-mediated gene disruption strategies rely on Cas9-induced DNA double-
strand breaks (DSBs). Here, we show that CRISPR-dependent base editing efficiently …
strand breaks (DSBs). Here, we show that CRISPR-dependent base editing efficiently …