Accurate transition state generation with an object-aware equivariant elementary reaction diffusion model

C Duan, Y Du, H Jia, HJ Kulik - Nature Computational Science, 2023 - nature.com
Transition state search is key in chemistry for elucidating reaction mechanisms and
exploring reaction networks. The search for accurate 3D transition state structures, however …

3DReact: Geometric Deep Learning for Chemical Reactions

P van Gerwen, KR Briling, C Bunne… - Journal of Chemical …, 2024 - ACS Publications
Geometric deep learning models, which incorporate the relevant molecular symmetries
within the neural network architecture, have considerably improved the accuracy and data …

Analytical ab initio hessian from a deep learning potential for transition state optimization

ECY Yuan, A Kumar, X Guan, ED Hermes… - Nature …, 2024 - nature.com
Identifying transition states—saddle points on the potential energy surface connecting
reactant and product minima—is central to predicting kinetic barriers and understanding …

A tabular data generation framework guided by downstream tasks optimization

F Jia, H Zhu, F Jia, X Ren, S Chen, H Tan… - Scientific Reports, 2024 - nature.com
Recently, generative models have been gradually emerging into the extended dataset field,
showcasing their advantages. However, when it comes to generating tabular data, these …

Zero-shot uncertainty quantification using diffusion probabilistic models

D Shu, AB Farimani - arXiv preprint arXiv:2408.04718, 2024 - arxiv.org
The success of diffusion probabilistic models in generative tasks, such as text-to-image
generation, has motivated the exploration of their application to regression problems …

Discrete Diffusion Schr\" odinger Bridge Matching for Graph Transformation

JH Kim, S Kim, S Moon, H Kim, J Woo… - arXiv preprint arXiv …, 2024 - arxiv.org
Transporting between arbitrary distributions is a fundamental goal in generative modeling.
Recently proposed diffusion bridge models provide a potential solution, but they rely on a …

Diffusion Generative Models for Designing Efficient Singlet Fission Dimers

L Kreimendahl, M Karnaukh… - The Journal of Physical …, 2024 - ACS Publications
Diffusion generative models, a class of machine learning techniques, have shown
remarkable promise in materials science and chemistry by enabling the precise generation …

Application and renovation evaluation of Dalian's industrial architectural heritage based on AHP and AIGC

Y Liu, P Wu, X Li, W Mo - PloS one, 2024 - journals.plos.org
This paper takes the example of industrial architectural heritage in Dalian to explore design
scheme generation methods based on generative artificial intelligence (AIGC). The study …

Deep Learning of ab initio Hessians for Transition State Optimization

ECY Yuan, A Kumar, X Guan, ED Hermes… - arXiv preprint arXiv …, 2024 - arxiv.org
Identifying transition states--saddle points on the potential energy surface connecting
reactant and product minima--is central to predicting kinetic barriers and understanding …

Riemannian Denoising Score Matching for Molecular Structure Optimization with Accurate Energy

J Woo, S Kim, JH Kim, WY Kim - arXiv preprint arXiv:2411.19769, 2024 - arxiv.org
This study introduces a modified score matching method aimed at generating molecular
structures with high energy accuracy. The denoising process of score matching or diffusion …