[HTML][HTML] On the extent of linkage disequilibrium in the genome of farm animals

S Qanbari - Frontiers in genetics, 2020 - frontiersin.org
Given the importance of linkage disequilibrium (LD) in gene mapping and evolutionary
inferences, I characterize in this review the pattern of LD and discuss the influence of human …

[HTML][HTML] Genome-wide selection signatures detection in Shanghai Holstein cattle population identified genes related to adaption, health and reproduction traits

D Liu, Z Chen, W Zhao, L Guo, H Sun, K Zhu, G Liu… - BMC genomics, 2021 - Springer
Background Over several decades, a wide range of natural and artificial selection events in
response to subtropical environments, intensive pasture and intensive feedlot systems have …

[HTML][HTML] Genome-wide analysis of the world's sheep breeds reveals high levels of historic mixture and strong recent selection

JW Kijas, JA Lenstra, B Hayes, S Boitard… - PLoS …, 2012 - journals.plos.org
Through their domestication and subsequent selection, sheep have been adapted to thrive
in a diverse range of environments. To characterise the genetic consequence of both …

[HTML][HTML] Genomic scan of selective sweeps in thin and fat tail sheep breeds for identifying of candidate regions associated with fat deposition

MH Moradi, A Nejati-Javaremi, M Moradi-Shahrbabak… - BMC genetics, 2012 - Springer
Background Identification of genomic regions that have been targets of selection for
phenotypic traits is one of the most important and challenging areas of research in animal …

[HTML][HTML] Genome-wide analysis reveals selection for important traits in domestic horse breeds

JL Petersen, JR Mickelson, AK Rendahl… - PLoS …, 2013 - journals.plos.org
Intense selective pressures applied over short evolutionary time have resulted in
homogeneity within, but substantial variation among, horse breeds. Utilizing this population …

[HTML][HTML] Classic selective sweeps revealed by massive sequencing in cattle

S Qanbari, H Pausch, S Jansen, M Somel… - PLoS …, 2014 - journals.plos.org
Human driven selection during domestication and subsequent breed formation has likely left
detectable signatures within the genome of modern cattle. The elucidation of these …

[HTML][HTML] Genomic scans for selection signatures revealed candidate genes for adaptation and production traits in a variety of cattle breeds

KA Saravanan, M Panigrahi, H Kumar, S Parida… - Genomics, 2021 - Elsevier
Domestication and selection are the major driving forces responsible for the determinative
genetic variability in livestock. These selection patterns create unique genetic signatures …

[HTML][HTML] Detection of selection signatures in dairy and beef cattle using high-density genomic information

F Zhao, S McParland, F Kearney, L Du… - Genetics Selection …, 2015 - Springer
Background Artificial selection for economically important traits in cattle is expected to have
left distinctive selection signatures on the genome. Access to high-density genotypes …

Mapping signatures of positive selection in the genome of livestock

S Qanbari, H Simianer - Livestock science, 2014 - Elsevier
Human driven selection during domestication and subsequent breed formation and
breeding has left detectable signatures within the genome of livestock breeds. The …

[HTML][HTML] Genome-wide scan for runs of homozygosity identifies potential candidate genes associated with local adaptation in Valle del Belice sheep

S Mastrangelo, M Tolone, MT Sardina, G Sottile… - Genetics Selection …, 2017 - Springer
Background Because very large numbers of single nucleotide polymorphisms (SNPs) are
now available throughout the genome, they are particularly suitable for the detection of …