[HTML][HTML] DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work

H Weigand, AJ Beermann, F Čiampor, FO Costa… - Science of the Total …, 2019 - Elsevier
Effective identification of species using short DNA fragments (DNA barcoding and DNA
metabarcoding) requires reliable sequence reference libraries of known taxa. Both …

A bigger toolbox: biotechnology in biodiversity conservation

RT Corlett - Trends in biotechnology, 2017 - cell.com
Conservation biology needs a bigger toolbox to meet unprecedented challenges. Genomics,
fueled by declining sequencing costs, offers novel tools with increased precision for genetic …

Validation of COI metabarcoding primers for terrestrial arthropods

V Elbrecht, TWA Braukmann, NV Ivanova, SWJ Prosser… - PeerJ, 2019 - peerj.com
Metabarcoding can rapidly determine the species composition of bulk samples and thus
aids biodiversity and ecosystem assessment. However, it is essential to use primer sets that …

Metabarcoding a diverse arthropod mock community

TWA Braukmann, NV Ivanova… - Molecular ecology …, 2019 - Wiley Online Library
Although DNA metabarcoding is an attractive approach for monitoring biodiversity, it is often
difficult to detect all the species present in a bulk sample. In particular, sequence recovery …

Sequence capture phylogenomics of historical ethanol‐preserved museum specimens: Unlocking the rest of the vault

S Derkarabetian, LR Benavides… - Molecular ecology …, 2019 - Wiley Online Library
Natural history collections play a crucial role in biodiversity research, and museum
specimens are increasingly being incorporated into modern genetics‐based studies …

Evaluating DNA barcoding for species identification and discovery in European gracillariid moths

C Lopez-Vaamonde, N Kirichenko, A Cama… - Frontiers in Ecology …, 2021 - frontiersin.org
Gracillariidae is the most species-rich leaf-mining moth family with over 2,000 described
species worldwide. In Europe, there are 263 valid named species recognized, many of …

Sequence capture and phylogenetic utility of genomic ultraconserved elements obtained from pinned insect specimens

BB Blaimer, MW Lloyd, WX Guillory, SG Brady - PloS one, 2016 - journals.plos.org
Obtaining sequence data from historical museum specimens has been a growing research
interest, invigorated by next-generation sequencing methods that allow inputs of highly …

Rapid identification of the botanical and entomological sources of honey using DNA metabarcoding

SWJ Prosser, PDN Hebert - Food Chemistry, 2017 - Elsevier
Honey is generated by various bee species from diverse plants, and because the value of
different types of honey varies more than 100-fold, it is a target for fraud. This paper …

A molecular‐based identification resource for the arthropods of Finland

T Roslin, P Somervuo, M Pentinsaari… - Molecular Ecology …, 2022 - Wiley Online Library
To associate specimens identified by molecular characters to other biological knowledge,
we need reference sequences annotated by Linnaean taxonomy. In this study, we (1) report …

A reference library for Canadian invertebrates with 1.5 million barcodes, voucher specimens, and DNA samples

JR DeWaard, S Ratnasingham, EV Zakharov… - Scientific data, 2019 - nature.com
The reliable taxonomic identification of organisms through DNA sequence data requires a
well parameterized library of curated reference sequences. However, it is estimated that just …