[HTML][HTML] Designing future crops: genomics-assisted breeding comes of age
Over the past decade, genomics-assisted breeding (GAB) has been instrumental in
harnessing the potential of modern genome resources and characterizing and exploiting …
harnessing the potential of modern genome resources and characterizing and exploiting …
[HTML][HTML] Towards population-scale long-read sequencing
W De Coster, MH Weissensteiner… - Nature Reviews …, 2021 - nature.com
Long-read sequencing technologies have now reached a level of accuracy and yield that
allows their application to variant detection at a scale of tens to thousands of samples …
allows their application to variant detection at a scale of tens to thousands of samples …
[HTML][HTML] Major impacts of widespread structural variation on gene expression and crop improvement in tomato
Structural variants (SVs) underlie important crop improvement and domestication traits.
However, resolving the extent, diversity, and quantitative impact of SVs has been …
However, resolving the extent, diversity, and quantitative impact of SVs has been …
Plant pan-genomes are the new reference
Recent years have seen a surge in plant genome sequencing projects and the comparison
of multiple related individuals. The high degree of genomic variation observed led to the …
of multiple related individuals. The high degree of genomic variation observed led to the …
[HTML][HTML] Pan-genome analysis of 33 genetically diverse rice accessions reveals hidden genomic variations
P Qin, H Lu, H Du, H Wang, W Chen, Z Chen, Q He… - Cell, 2021 - Elsevier
Structural variations (SVs) and gene copy number variations (gCNVs) have contributed to
crop evolution, domestication, and improvement. Here, we assembled 31 high-quality …
crop evolution, domestication, and improvement. Here, we assembled 31 high-quality …
[HTML][HTML] Reap the crop wild relatives for breeding future crops
Crop wild relatives (CWRs) have provided breeders with several'game-changing'traits or
genes that have boosted crop resilience and global agricultural production. Advances in …
genes that have boosted crop resilience and global agricultural production. Advances in …
Twenty years of plant genome sequencing: achievements and challenges
Y Sun, L Shang, QH Zhu, L Fan, L Guo - Trends in plant science, 2021 - Elsevier
Publication of the complete genome sequence of Arabidopsis thaliana, the first plant
reference genome, in December 2000 heralded the beginning of the plant genome era …
reference genome, in December 2000 heralded the beginning of the plant genome era …
Genomic selection and genetic architecture of agronomic traits during modern rapeseed breeding
J Hu, B Chen, J Zhao, F Zhang, T Xie, K Xu, G Gao… - Nature Genetics, 2022 - nature.com
Rapeseed (Brassica napus L.) is an important oil-producing crop for the world. Its
adaptation, yield and quality have been considerably improved in recent decades, but the …
adaptation, yield and quality have been considerably improved in recent decades, but the …
[HTML][HTML] Cotton pan-genome retrieves the lost sequences and genes during domestication and selection
Millennia of directional human selection has reshaped the genomic architecture of cultivated
cotton relative to wild counterparts, but we have limited understanding of the selective …
cotton relative to wild counterparts, but we have limited understanding of the selective …
[HTML][HTML] Genome-and transcriptome-wide association studies provide insights into the genetic basis of natural variation of seed oil content in Brassica napus
Seed oil content (SOC) is a highly important and complex trait in oil crops. Here, we
decipher the genetic basis of natural variation in SOC of Brassica napus by genome-and …
decipher the genetic basis of natural variation in SOC of Brassica napus by genome-and …