Mechanisms and regulation of DNA replication initiation in eukaryotes

MW Parker, MR Botchan, JM Berger - Critical reviews in …, 2017 - Taylor & Francis
Cellular DNA replication is initiated through the action of multiprotein complexes that
recognize replication start sites in the chromosome (termed origins) and facilitate duplex …

MCM2-7 loading-dependent ORC release ensures genome-wide origin licensing

LM Reuter, SP Khadayate, A Mossler, K Liebl… - Nature …, 2024 - nature.com
Origin recognition complex (ORC)-dependent loading of the replicative helicase MCM2-7
onto replication origins in G1-phase forms the basis of replication fork establishment in S …

OriDB, the DNA replication origin database updated and extended

CC Siow, SR Nieduszynska, CA Müller… - Nucleic acids …, 2012 - academic.oup.com
Abstract OriDB (http://www. oridb. org/) is a database containing collated genome-wide
mapping studies of confirmed and predicted replication origin sites. The original database …

DnaA and ORC: more than DNA replication initiators

G Scholefield, JW Veening, H Murray - Trends in cell biology, 2011 - cell.com
Mutations in DNA replication initiator genes in both prokaryotes and eukaryotes lead to a
pleiotropic array of phenotypes, including defects in chromosome segregation, cytokinesis …

Conservation of replication timing reveals global and local regulation of replication origin activity

CA Müller, CA Nieduszynski - Genome research, 2012 - genome.cshlp.org
DNA replication initiates from defined locations called replication origins; some origins are
highly active, whereas others are dormant and rarely used. Origins also differ in their …

Mathematical modelling of whole chromosome replication

APS de Moura, R Retkute, M Hawkins… - Nucleic acids …, 2010 - academic.oup.com
All chromosomes must be completely replicated prior to cell division, a requirement that
demands the activation of a sufficient number of appropriately distributed DNA replication …

Sub1 and RPA associate with RNA polymerase II at different stages of transcription

TW Sikorski, SB Ficarro, J Holik, TS Kim, OJ Rando… - Molecular cell, 2011 - cell.com
Single-stranded DNA-binding proteins play many roles in nucleic acid metabolism, but their
importance during transcription remains unclear. Quantitative proteomic analysis of RNA …

The conserved bromo-adjacent homology domain of yeast Orc1 functions in the selection of DNA replication origins within chromatin

P Müller, S Park, E Shor, DJ Huebert… - Genes & …, 2010 - genesdev.cshlp.org
The origin recognition complex (ORC) binds to the specific positions on chromosomes that
serve as DNA replication origins. Although ORC is conserved from yeast to humans, the …

A dynamic interplay of nucleosome and Msn2 binding regulates kinetics of gene activation and repression following stress

N Elfving, RV Chereji, V Bharatula… - Nucleic acids …, 2014 - academic.oup.com
The transcription factor Msn2 mediates a significant proportion of the environmental stress
response, in which a common cohort of genes changes expression in a stereotypic fashion …

Ubiquitylation of FACT by the cullin-E3 ligase Rtt101 connects FACT to DNA replication

J Han, Q Li, L McCullough, C Kettelkamp… - Genes & …, 2010 - genesdev.cshlp.org
FACT plays important roles in both gene transcription and DNA replication. However, how
this protein complex is targeted to these two distinct cellular processes remains largely …