[HTML][HTML] A phylogenomic framework and timescale for comparative studies of tunicates

F Delsuc, H Philippe, G Tsagkogeorga, P Simion… - Bmc Biology, 2018 - Springer
Background Tunicates are the closest relatives of vertebrates and are widely used as
models to study the evolutionary developmental biology of chordates. Their phylogeny …

[HTML][HTML] Status, change, and futures of zooplankton in the Southern Ocean

NM Johnston, EJ Murphy, A Atkinson… - Frontiers in Ecology …, 2022 - frontiersin.org
In the Southern Ocean, several zooplankton taxonomic groups, euphausiids, copepods,
salps and pteropods, are notable because of their biomass and abundance and their roles …

ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets

M Brozovic, C Dantec, J Dardaillon… - Nucleic acids …, 2018 - academic.oup.com
Abstract ANISEED (www. aniseed. cnrs. fr) is the main model organism database for
tunicates, the sister-group of vertebrates. This release gives access to annotated genomes …

An in situ digital synthesis strategy for the discovery and description of ocean life

JA Burns, KP Becker, D Casagrande, J Daniels… - Science …, 2024 - science.org
Revolutionary advancements in underwater imaging, robotics, and genomic sequencing
have reshaped marine exploration. We present and demonstrate an interdisciplinary …

[HTML][HTML] Salpa genome and developmental transcriptome analyses reveal molecular flexibility enabling reproductive success in a rapidly changing environment

KR Castellano, P Batta-Lona, A Bucklin, RJ O'Neill - Scientific Reports, 2023 - nature.com
Ocean warming favors pelagic tunicates, such as salps, that exhibit increasingly frequent
and rapid population blooms, impacting trophic dynamics and composition and human …

Genomic basis of environmental adaptation in the leathery sea squirt (Styela clava)

J Wei, J Zhang, Q Lu, P Ren, X Guo… - Molecular Ecology …, 2020 - Wiley Online Library
Tunicates occupy the evolutionary position at the boundary of invertebrates and vertebrates.
It exhibits adaptation to broad environmental conditions and is distributed globally. Despite …

[HTML][HTML] De novo draft assembly of the Botrylloides leachii genome provides further insight into tunicate evolution

S Blanchoud, K Rutherford, L Zondag, NJ Gemmell… - Scientific reports, 2018 - nature.com
Tunicates are marine invertebrates that compose the closest phylogenetic group to the
vertebrates. These chordates present a particularly diverse range of regenerative abilities …

Population genomics of marine zooplankton

A Bucklin, KR DiVito, I Smolina, M Choquet… - Population genomics …, 2020 - Springer
The exceptionally large population size and cosmopolitan biogeographic distribution that
distinguish many–but not all–marine zooplankton species generate similarly exceptional …

[HTML][HTML] Transcriptome sequencing of seven deep marine invertebrates

JA Burns, J Daniels, KP Becker, D Casagrande… - Scientific Data, 2024 - nature.com
We present 4k video and whole transcriptome data for seven deep-sea invertebrate animals
collected in the Eastern Pacific Ocean during a research expedition onboard the Schmidt …

De novo genome assembly and comparative genomics for the colonial ascidian Botrylloides violaceus

JT Sumner, CL Andrasz, CA Johnson… - G3: Genes …, 2023 - academic.oup.com
Ascidians have the potential to reveal fundamental biological insights related to coloniality,
regeneration, immune function, and the evolution of these traits. This study implements a …