Syntenies are genomic segments of consecutive genes identified by a certain conservation
in gene content and order. The notion of conservation may vary from one definition to …

Reconciling gene trees with a species tree is a fundamental problem to understand the
evolution of gene families. Many existing approaches reconcile each gene tree …

We present Synesth, the most comprehensive and flexible tool for tree reconciliation that
allows for events on syntenies (ie, on sets of multiple genes), including duplications …

We generalize the reconciliation approach, used for inferring the evolution of a single gene
family given a species tree, to groups of co-localized genes, also called syntenies. More …

We present FullSynesth, a tree reconciliation algorithm predicting the evolution of a set of
homologous genomic regions or syntenies, inside a species tree. The considered …

Reconciling gene trees with a species tree is a fundamental problem to understand the
evolution of gene families. Many existing approaches reconcile each gene tree …